Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,101,080	A→G	A76A (GCT→GCC)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,101,080	0	A	G	100.0%	19.1 / NA	9	A76A (GCT→GCC)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (2/7);  total (2/7)

ATTCAGTTCATTTGCTTGTTTGTTATATTCTTGTCGTAACTTTTGAGCTCCTGCACTGTTTTCGCCCTGTTCTTGAGATACCTTGTCATATTGCTTAGCTAAATCATCAACGTTTTTCTTATAACCTGTGATAGTTCCATCAAGTTCTTTAATCCTTTGTTTGT  >  NC_007793/2100984‑2101147                                                                                                 |                                                                    atTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCt                                                                  <  1:4419539/100‑1 (MQ=255)   tCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTaa                                                                <  1:2231766/100‑1 (MQ=255)   tCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTaa                                                                <  1:66503/100‑1 (MQ=255)          aTTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAAtcatca                                                         <  1:729503/100‑1 (MQ=255)                             tCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACATTTTTCTTATAACCta                                      <  1:402736/100‑2 (MQ=255)                                 gccGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACATTTTTCTTATAACCTATGAt                                  >  1:3468290/3‑100 (MQ=255)                                 gccGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACATTTTTCTTATAACCTATGAt                                  <  1:441957/98‑1 (MQ=255)                                                   cTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACTTTTTTCTTATAACCTATGATAGTTCCGTCAAGTTCttt                >  1:2211669/1‑100 (MQ=255)                                                                 cccTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACATTTTTCTTATAACCTATGATAGTTCCGTCAAGTTCTTTAATCCTttgttggt  <  1:3981476/100‑1 (MQ=255)                                                                                                 |                                                                    ATTCAGTTCATTTGCTTGTTTGTTATATTCTTGTCGTAACTTTTGAGCTCCTGCACTGTTTTCGCCCTGTTCTTGAGATACCTTGTCATATTGCTTAGCTAAATCATCAACGTTTTTCTTATAACCTGTGATAGTTCCATCAAGTTCTTTAATCCTTTGTTTGT  >  NC_007793/2100984‑2101147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑