Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,101,047	G→A	G87G (GGC→GGT)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,101,047	0	G	A	100.0%	37.8 / NA	15	G87G (GGC→GGT)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (2/13);  total (2/13)

TGATGTTTTTTGTAATTCTCTTTCTAAATAATTCAGTTCATTTGCTTGTTTGTTATATTCTTGTCGTAACTTTTGAGCTCCTGCACTGTTTTCGCCCTGTTCTTGAGATACCTTGTCATATTGCTTAGCTAAATCATCAACGTTTTTCTTATAACCTGTGATAGTTCCATCAAGTTCTTT  >  NC_007793/2100954‑2101133                                                                                              |                                                                                       cgATGTTTTTTGCAATTCTCTTTCTAAATAATTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCCGCACTGTTTTCAcccgcg                                                                                  <  1:3886189/99‑4 (MQ=255)      ttttttGCAATTCTCTTTCTAAATAATTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTg                                                                             <  1:1582376/100‑1 (MQ=255)      ttttttGCAATTCTCTTTCTAAATAATTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTg                                                                             <  1:547994/100‑1 (MQ=255)       tttttGCAATTCTCTTTCTAAATAATTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTgg                                                                            <  1:3229010/100‑2 (MQ=255)                  ctctTTCTAAATAATTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTc                                                                 <  1:5617698/100‑1 (MQ=255)                  ctctTTCTAAATAATTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTc                                                                 <  1:5707703/100‑1 (MQ=255)                       tCTAAATAATTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATAtt                                                            <  1:5402591/100‑1 (MQ=255)                               atTCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCt                                                    <  1:4419539/100‑1 (MQ=255)                                 tCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTaa                                                  <  1:2231766/100‑1 (MQ=255)                                 tCAGCTCATTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTaa                                                  <  1:66503/100‑1 (MQ=255)                                        aTTTGCTTGTTTGTTATATTCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAAtcatca                                           <  1:729503/100‑1 (MQ=255)                                                           tCTTGCCGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACATTTTTCTTATAACCta                        <  1:402736/100‑2 (MQ=255)                                                               gccGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACATTTTTCTTATAACCTATGAt                    >  1:3468290/3‑100 (MQ=255)                                                               gccGTAATTTTTGAGCTTCTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACATTTTTCTTATAACCTATGAt                    <  1:441957/98‑1 (MQ=255)                                                                                 cTGCACTGTTTTCACCCTGTTCTTGAGATACCTTGTCATATTGCTTGGCTAAATCATCAACTTTTTTCTTATAACCTATGATAGTTCCGTCAAGTTCttt  >  1:2211669/1‑100 (MQ=255)                                                                                              |                                                                                       TGATGTTTTTTGTAATTCTCTTTCTAAATAATTCAGTTCATTTGCTTGTTTGTTATATTCTTGTCGTAACTTTTGAGCTCCTGCACTGTTTTCGCCCTGTTCTTGAGATACCTTGTCATATTGCTTAGCTAAATCATCAACGTTTTTCTTATAACCTGTGATAGTTCCATCAAGTTCTTT  >  NC_007793/2100954‑2101133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑