Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,098,509	T→C	E933E (GAA→GAG)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,098,509	0	T	C	100.0%	37.8 / NA	15	E933E (GAA→GAG)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (3/12);  total (3/12)

GACCATTTCCACGTCCTTTATCCCCAACCGTAGCGAACGTATCCCGCGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGTTCTGTACCAGTGTGTAACTTAGGTATTTTATCCATTCCCAGCTTACCACCGACCCAGTTTAAACCTTCAATTAATTTATTAAGTCCT  >  NC_007793/2098418‑2098596                                                                                            |                                                                                        ccgatcttCCGCGTCCCTTATCTCCAACTGTAACGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTAcc                                                                                 <  1:2438123/94‑1 (MQ=255)        tCCGCGTCCCTTATCTCCAACTGTAGCGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAgtatgt                                                                          <  1:1354825/100‑1 (MQ=255)                             tgTAGCGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCAtg                                                     <  1:4637946/99‑2 (MQ=255)                                 gCGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCa                                                 <  1:4181373/100‑1 (MQ=255)                                            tcttccgaTCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCg                                      <  1:604771/93‑1 (MQ=255)                                                tgtgctcttccGATCTTAACCAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGAccc                                  <  1:140138/91‑1 (MQ=255)                                                gcAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGAccc                                  <  1:151106/100‑1 (MQ=255)                                                gcAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGAccc                                  <  1:2644946/100‑1 (MQ=255)                                                 cAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGACCCa                                 <  1:267046/100‑1 (MQ=255)                                                    ctcttccGATCTTATTTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGACCCAGtc                              <  1:919333/95‑2 (MQ=255)                                                    ctcttccGATCTTAACTTATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGACCCAgct                              <  1:3562694/95‑3 (MQ=255)                                                     cTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGACCCAGttt                             <  1:2216768/100‑1 (MQ=255)                                                                tAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGACCCAGTTTAAACCGTCgat                  >  1:652432/1‑100 (MQ=255)                                                                             agtagtaTGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGACCCAGTTTAAACCGTCGATTAATTTATTAAGt     >  1:4791657/1‑100 (MQ=255)                                                                                agtaTGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCAACTTACCACCGACCCAGTTTAAACCGTCGATTAATTTATTAAGTCCt  >  1:2673312/1‑100 (MQ=255)                                                                                            |                                                                                        GACCATTTCCACGTCCTTTATCCCCAACCGTAGCGAACGTATCCCGCGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGTTCTGTACCAGTGTGTAACTTAGGTATTTTATCCATTCCCAGCTTACCACCGACCCAGTTTAAACCTTCAATTAATTTATTAAGTCCT  >  NC_007793/2098418‑2098596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑