Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,098,464	C→T	A948A (GCG→GCA)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,098,464	0	C	T	100.0%	13.7 / NA	7	A948A (GCG→GCA)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (1/6);  total (1/6)

TACACGTTTACCATTAGGGAATTCAATTATTTCATTTCTGAAACCATTCGGACCATTTCCACGTCCTTTATCCCCAACCGTAGCGAACGTATCCCGCGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGTTCTGTACCAGTGTGTAACTTAGGTATTTTATCCATTCCCA  >  NC_007793/2098368‑2098549                                                                                                 |                                                                                      tACACGTTTACCATTAGGGAATTCAATCATTTCGTTTCTAAAACCATTTGGACCATTTCCGCGTCCCTTATCTCCAACTGTAGCGAATGTGTCACGTGCa                                                                                    >  1:5258549/1‑100 (MQ=255)                           tcatttcgtttcTAAAACCATTTGGACCATTTCCGCGTCCCTTATCTCCAACTGTAGCGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTgt                                                          <  1:3739005/98‑1 (MQ=255)                           ctattTCATTTCTAAAACCATTTGGACCATTTCCACGTCCTTTATCCCCAACTGTAGCGAATGTATCACGTGCAATCTTACCGTTCTTAACTAATCTTgt                                                          <  1:1390494/99‑1 (MQ=255)                                                   ccgatcttCCGCGTCCCTTATCTCCAACTGTAACGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTAcc                                  <  1:2438123/94‑1 (MQ=255)                                                          tCCGCGTCCCTTATCTCCAACTGTAGCGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAgtatgt                           <  1:1354825/100‑1 (MQ=255)                                                                               tgTAGCGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCAtg      <  1:4637946/99‑2 (MQ=255)                                                                                   gCGAATGTGTCACGTGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGCTCTGTACCAGTATGTAACTTAGGTATTTTATCCATGCCCa  <  1:4181373/100‑1 (MQ=255)                                                                                                 |                                                                                      TACACGTTTACCATTAGGGAATTCAATTATTTCATTTCTGAAACCATTCGGACCATTTCCACGTCCTTTATCCCCAACCGTAGCGAACGTATCCCGCGCAATCTTACCGTTCTTAACTAATCTTGTAGTAGTATGTGTGTGTTCTGTACCAGTGTGTAACTTAGGTATTTTATCCATTCCCA  >  NC_007793/2098368‑2098549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑