Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,098,344	G→A	T988T (ACC→ACT)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,098,344	0	G	A	100.0%	12.2 / NA	6	T988T (ACC→ACT)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (3/3);  total (3/3)

ACATAGTACCTAAGCTAAATCTTGGAAGCGTTCCGTTTAACATTGAATAAGTTTGTGTACCGTTGTATACTTTTGAGCCTTTAGGTAAATAAGCGGTAGTATCTGTATTAGGTGTGATTACACGTTTACCATTAGGGAATTCAATTATTTCATTTCTGAAACCATTCGGACCATT  >  NC_007793/2098250‑2098424                                                                                               |                                                                                 acaTAGTACCTAAACTAAATCTTGGAAGAGTTCCGTTTAACATTGAATAAGTTTGTGCACCGTTATATACTTTTGAGCCTTTAGGTAAATAAGCAgttag                                                                             >  1:5764781/1‑97 (MQ=255)                               ttCCGTTTAACATTGAATAAGTTTGTGCACCGTTATATACTTTTGAGCCTTTAGGTAAATAAGCAGTAGTATCTGTATTTGGTGTGATTACACGTTTAcc                                               <  1:3251291/100‑1 (MQ=255)                                                     ctgtgCACCGTTATATACTTTTGAGCCTTTAGGTAAATAAGCAGTAGTATCTGTATTTGGTGTGATTACACGTTTACCATTAGGGAATTCAATCatttcg                         >  1:2509212/2‑99 (MQ=255)                                                                  tatgCTTTTGAGCCTTTAGGTAAATAAGCAGTAGTATCTGTATTTGGTGTGATTACACGTTTACCATTAGGGAATTCAATCATTTCGTTTCTAAAACCAt            <  1:1096311/100‑1 (MQ=255)                                                                            aGCCTTTAGGTAAATAAGCAGTAGTATCTGTCTTTGGTGTGATTACACGATTACCATTAGGGAATTCAATAATTTCGTTTCTAAAACCATATGGACCAtt  >  1:4349343/1‑100 (MQ=255)                                                                            aGCCTTTAGGTAAATAAGCAGTAGTATCTGTATTTGGTGTGATTACACGTTTACCATTAGGGAATTCAATCATTTCGTTTCTAAAACCATTTGGACCAtt  <  1:1214534/100‑1 (MQ=255)                                                                                               |                                                                                 ACATAGTACCTAAGCTAAATCTTGGAAGCGTTCCGTTTAACATTGAATAAGTTTGTGTACCGTTGTATACTTTTGAGCCTTTAGGTAAATAAGCGGTAGTATCTGTATTAGGTGTGATTACACGTTTACCATTAGGGAATTCAATTATTTCATTTCTGAAACCATTCGGACCATT  >  NC_007793/2098250‑2098424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑