Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,098,128	G→T	G1060G (GGC→GGA)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,098,128	0	G	T	100.0%	17.3 / NA	8	G1060G (GGC→GGA)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (2/6);  total (2/6)

TTTTGTTATGTCGCCTGCAATTCCCATACCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTGCCAGGATTTTCCATAAAATCTAAAACATCGCCAACTTTATCGCCAAGCCATTTGGTACCTTTACCTATTTGATCTTTTGTCCAGTT  >  NC_007793/2098041‑2098214                                                                                        |                                                                                       ttttGTTATGTCGCCTGCAATTCCCATTCCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTTCCTGGATGTTca                                                                            <  1:1017336/100‑2 (MQ=255)    tGTTATGTCGCCTGCAATTCCCATTCCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTTCCTGGATGTTCAATa                                                                         <  1:1388463/100‑1 (MQ=255)            cGCCTGCAATTCCCATTCCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTTCCTGGATGTTCAATAAAATCTaa                                                                 >  1:1752558/1‑100 (MQ=255)                 gCAATTCCCATTCCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTTCCTGGATGTTCAATAAAATCTAAAACAt                                                            >  1:78506/1‑100 (MQ=255)                                    ttAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTTCCTGGATGTTCAATAAAATCTAAAACATCGCCAACTTTATCGCCAAg                                         <  1:3161542/100‑1 (MQ=255)                                     tAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTTCCTGGATGTTCAATAAAATCTAAAACATCGCCAACTTTATCGCCAAga                                        <  1:3277912/100‑2 (MQ=255)                                          aaTTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTTCCTGGATGTTCAATAAAATCTAAAACATCGCCAACTTTATCGCCAAGCCAttt                                   <  1:3840298/100‑1 (MQ=255)                                                                           aaTTTAAAAGTTTTCCTGGATGTTCAATAAAATCTAAAACATCGCCAACTTTATCGCCAAGCCATTTGGTACCTTTACCTATTTGATCTTTTGTCCAGtt  <  1:1744682/100‑1 (MQ=255)                                                                                        |                                                                                       TTTTGTTATGTCGCCTGCAATTCCCATACCTTTAGTTAAAGAATTGAAATCAATTCCAAAAGCTTCAAGTATATAATTTAAAAGTTTGCCAGGATTTTCCATAAAATCTAAAACATCGCCAACTTTATCGCCAAGCCATTTGGTACCTTTACCTATTTGATCTTTTGTCCAGTT  >  NC_007793/2098041‑2098214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑