Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,097,804	T→C	P1168P (CCA→CCG)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,097,804	0	T	C	100.0%	10.5 / NA	6	P1168P (CCA→CCG)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (3/3);  total (3/3)

AGGTGGTGATTTGCTAAAGTTTTTCAAATGCGCAAATAGCATATCGATAACTCCACTAGTAATTTTTACATAATTACCATAACCACCAGACATAAATGGCATTCTTGTAAGTCTGCCACCCATCGGCGTTCTAACTTCTTGATATACAAATGGAAAATCGACACCTTCATGAAATGGTCTTCCAGT  >  NC_007793/2097708‑2097893                                                                                                 |                                                                                          aGGTGGTGATTTGCTAAAGTTTTTCAAATGCGCAAATAGCATATCGATAACGCCACTAGTAATTTTTACATAGTTACCATAACCACCAGACATAAACggg                                                                                        <  1:3262271/100‑2 (MQ=255)                      tttCAAATGCGCAAATAGCATATCGATAACGCCACTAGTAATTTTTACATAGTTACCATAACCACCAGACATAAACGGCATTCTTGTAAGTCTACCAccc                                                                   <  1:4067479/100‑1 (MQ=255)                                                       aCTAGTAATTTTTACATAGTTACCATAACCACCAGACATAAACGGCATTCTTGTAAGTCTACCACCCATAGGCGTTCTAACTTCTTGATATACAAATGGa                                  <  1:2637601/100‑1 (MQ=255)                                                                                 aaCCACCAGACATAAACGGCATTCTTGTAAGTCTACCACCCATAGGCGTTCTAACTTCTTGATATACAAATGGAAAATCGACACCTTCATGAAATGGTCt        >  1:2351531/1‑100 (MQ=255)                                                                                 aaCCACCAGACATAAACGGCATTCTTGTAAGTCTACCACCCATAGGCGTTCTAACTTCTTGATATACAAATGGAAAATCGACACCTTCATGAAATGGTCt        >  1:4760488/1‑100 (MQ=255)                                                                                       caGACATAAACGGCATTCTTGTAAGTCTACCACCCATAGGCGTTCTAACTTCTTGATATACAAATGGAAAATCGACACCTTCATGAAATGGTCTTCCAGt  >  1:4388371/1‑100 (MQ=255)                                                                                                 |                                                                                          AGGTGGTGATTTGCTAAAGTTTTTCAAATGCGCAAATAGCATATCGATAACTCCACTAGTAATTTTTACATAATTACCATAACCACCAGACATAAATGGCATTCTTGTAAGTCTGCCACCCATCGGCGTTCTAACTTCTTGATATACAAATGGAAAATCGACACCTTCATGAAATGGTCTTCCAGT  >  NC_007793/2097708‑2097893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑