Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,097,276	C→T	P1344P (CCG→CCA)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,097,276	0	C	T	100.0%	14.6 / NA	7	P1344P (CCG→CCA)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (1/6);  total (1/6)

TTCCACCTGTAGCATATGCGTAATCACCAGCACGCTTAAATCCATCCCAACCGTAGCGTCTAACAATGTACTGCATTGCTGAAATACCTTGATGAACCGGATTATTAAAGTTAGTATATCCACGTTTAGCGTTTGCTCTAAAAGTTGAGCCGATG  >  NC_007793/2097179‑2097333                                                                                                  |                                                          ttCCACCTGTAGCATATGCGTAATCACCAGCACGTTTAAAACCACCCCATCCATATCGTCTAACAATGTACTGCATTGCTGAGATACCTTGATGTACTgg                                                         <  1:5615444/100‑1 (MQ=255) ctCCACCTGTAGCATATGCTTAATCACCAGCACGTTTAAAACCACCCCAACCATATCGTCTAACAATGTACTGCATTGCTGAGATACCTTGATGTACTgg                                                         >  1:5172302/2‑100 (MQ=255)   cgatcTGTAGCATATGCGTAATCACCAGCACGTTTAAAACCACCCCAACCATATCGTCTAACAATGTACTGCATTGCTGAGATACCTTGATGTACTGGat                                                       <  1:2842782/96‑1 (MQ=255)                  gCGTAATCACCAGCACGTTTAAAACCAACCCAACCATACCGTCTAACAATGTACTGCATTGCTGAGATACCTTGATGTACTGGATTATTATAATTAGtgt                                        <  1:50486/100‑3 (MQ=255)                    gTAATCACCAGCACGTTTAAA‑CCACCCCAACCATATCGTCTAACAATGTACTGCATTGCTGAGATACCTTGATGTACTGGATTATTATAATTAGtgtacc                                     <  1:1148183/100‑3 (MQ=255)                                  gtttAAAACCACCCCAACCATATCGTCTAACAATGTACTGCATTGCTGAGATACCTTGATGTACTGGATTATTATAATTAGTGTACCCTCGTTTAGCGtt                        <  1:4971068/98‑1 (MQ=255)                                                        tcGTCTAACAATGTACTGCATTGCTGAGATACCTTGATGTACTGGATTATTATAATTAGTGTACCCTCGTTTAGCGTTAGCTCTAAAAGTTGAGCCgata  <  1:1974077/99‑2 (MQ=255)                                                                                                  |                                                          TTCCACCTGTAGCATATGCGTAATCACCAGCACGCTTAAATCCATCCCAACCGTAGCGTCTAACAATGTACTGCATTGCTGAAATACCTTGATGAACCGGATTATTAAAGTTAGTATATCCACGTTTAGCGTTTGCTCTAAAAGTTGAGCCGATG  >  NC_007793/2097179‑2097333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑