| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 14,363 | C→T | intergenic (+264/‑386) | SAUSA300_RS00050 → / → SAUSA300_RS00055 | serine‑‑tRNA ligase/azaleucine resistance protein AzlC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 14,363 | 0 | C | T | 100.0% | 49.2 / NA | 19 | intergenic (+264/‑386) | SAUSA300_RS00050/SAUSA300_RS00055 | serine‑‑tRNA ligase/azaleucine resistance protein AzlC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (9/10); total (9/10) | |||||||||||
GTGGTTTAATGGGGTGAACGCATTTCATTATAGCAACAATACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACCAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAGGGGGAGGGGATGATTATA > NC_007793/14267‑14455 | gtgGTTTAATGGGGTGAACGCATTTCATTATAGCAACAATACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACTAat > 1:2964675/1‑100 (MQ=255) caaTGGGGTGAACGCATTTCATTATAGCAACAATACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACTAATATagga > 1:96873/2‑100 (MQ=255) aaTGGGGTGAACGCATTTCATTATAGCAACAATACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACTAATACaggag > 1:1645354/1‑99 (MQ=255) gAACGCATTTCATTATAGCAACAATACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCg > 1:877187/1‑100 (MQ=255) aaCGCATTTCATTATAGCAACAATACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGa > 1:740301/1‑100 (MQ=255) agacaaTACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGt > 1:5685496/3‑100 (MQ=255) accGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGatat > 1:5130858/3‑100 (MQ=255) aaaaCGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAgtagggtag > 1:583705/1‑100 (MQ=255) aaCGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGtagggtaggg < 1:3075616/100‑1 (MQ=255) cGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAggggg < 1:424094/100‑1 (MQ=255) cGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAggggg < 1:5023695/100‑1 (MQ=255) cGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAggggg < 1:2935488/100‑1 (MQ=255) cGTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAggggg < 1:2699593/100‑1 (MQ=255) agTAACAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAgtagggtagatcg > 1:5696951/2‑96 (MQ=255) tAACAAGTTTGAGCACCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAGggggag < 1:3305812/100‑1 (MQ=255) aaCAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAGggggagg < 1:4071960/100‑1 (MQ=255) aaCAAGTTTGAGCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAGggggagg < 1:3789355/100‑1 (MQ=255) gCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAGGGGGAGGGGATGATtata < 1:961338/100‑1 (MQ=255) gCATCACTAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAGGGGGAGGGGATGATtata < 1:1896571/100‑1 (MQ=255) | GTGGTTTAATGGGGTGAACGCATTTCATTATAGCAACAATACGGGATAATTATGATGAACTAAAACAATCTAAAACGTAACAAGTTTGAGCATCACCAATATAGGAAAGGAAGCGATAAAATACTGATTTCGTTGATATGTAGTATGAGTTATATCGATGGAGTAGGGTAGGGGGAGGGGATGATTATA > NC_007793/14267‑14455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |