Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,097,084	C→A	M1408I (ATG→ATT)	SAUSA300_RS10590 ←	phage tail tape measure protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,097,084	0	C	A	100.0%	25.5 / NA	11	M1408I (ATG→ATT)	SAUSA300_RS10590	phage tail tape measure protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (8/3);  total (8/3)

GACAATTGACTAGGACGCTTATTTTTACTCGCTTTTCTCCCTCTTACTTCTGCTGCTGCATAATGCAACATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTGGAATAATCCATTCTGGATGACCGTCTTCACCTAAGTTATACCAAC  >  NC_007793/2097016‑2097166                                                                     |                                                                                   gataaTTGGCTAGGACGCTTATTTTTACTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGccagat                                                     >  1:875929/4‑95 (MQ=255) gataaTTGGCTAGGACGCTTATTTTTACTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTAGAt                                                     >  1:2002687/4‑100 (MQ=255) gataaTTGGCTAGGACGCTTATTTTTACTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTAGAt                                                     >  1:855902/4‑100 (MQ=255)       tggcTAGGACGCTTATTTTTACTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTg                                               >  1:904879/4‑100 (MQ=255)       tggcTAGGACGCTTATTTTTACTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTAGATcggaag                                               >  1:2312119/4‑95 (MQ=255)            aGGACGCTTATTTTTACTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTGGaata                                          >  1:284816/1‑100 (MQ=255)                           aCTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTGGAATAATCCATTCTGGATGa                           >  1:3808117/1‑100 (MQ=255)                           aCTCGCTTTTTTCCCTCTTACTTCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTGGAATAATCCATTCTGGATGa                           >  1:465554/1‑100 (MQ=255)                                               gatCTGCTGCTGCATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTGGAATAATCCATTCTGGATGACCGTCTTCACCTAAGTtatt       <  1:5520652/98‑2 (MQ=255)                                                 cttgctgctgcATAATGCAAAATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTGGAATAATCCATTCTGGATGACCGTCTTCACCTAAGTTATacc     <  1:343619/98‑1 (MQ=255)                                                    gctgctgcATAATGCAAAATCTCCATTGCATCATTTCTACGAGCTGGATCTGTTGGAATAATCCATTCTGGATGACCGTCTTCACCTAAGTTATaccagc  <  1:4615577/100‑3 (MQ=255)                                                                     |                                                                                   GACAATTGACTAGGACGCTTATTTTTACTCGCTTTTCTCCCTCTTACTTCTGCTGCTGCATAATGCAACATCTTCATTGCATCATTTCTACGAGCTGGATCTGTTGGAATAATCCATTCTGGATGACCGTCTTCACCTAAGTTATACCAAC  >  NC_007793/2097016‑2097166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑