Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,095,465 T→C V439V (GTA→GTG)  SAUSA300_RS10585 ← phage tail protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,095,4650TC100.0% 13.7 / NA 7V439V (GTA→GTG) SAUSA300_RS10585phage tail protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (2/5);  total (2/5)

CCAGAATCAACATTGAAATAATTACTTCCAAACGATTTCTCGCTCAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTTACTAAATCACCTTTTTGTATAATGACATCCCTTGCGCCTTTCGGTTTTGGTAGAATCTCCGTATTG  >  NC_007793/2095370‑2095531
                                                                                               |                                                                  
ccAGAATCAACATTGAAATAATTACTTCCAAACGATTTCTCGCTCAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTCACTa                                                                >  1:4865647/1‑100 (MQ=255)
                 ataatTACTTCCAAACGATTTCTCGCTCAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTCACTAAATCACCTTTTTGtata                                               <  1:1767320/100‑1 (MQ=255)
                                      ctcGCTCAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTCACTAAATCACCTTTTTGTATAATGACATCCCTTGCGCCttgg                          <  1:3726586/100‑3 (MQ=255)
                                      ctcGCTCAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTCACTAAATCACCTTTTTGTATAATGACATCCCTTGCGCCttag                          <  1:4953355/100‑3 (MQ=255)
                                          cTCAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTCACTAAATCACCTTTTTGTATAATGACATCCCTTGCGCCTTTCGGtt                      <  1:4433612/100‑1 (MQ=255)
                                            cAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTCACTAAATCACCTTTTTGTATAATGACATCCCTTGCGCCTTTCGGtttc                    >  1:4189398/1‑99 (MQ=255)
                                                              gatgaCAACACTTTTTGCTTGCATATCTATTTTCACTAAATCACCTTTTTGTATAATGACATCCCTTGCGCCTTTCGGTTTCGGTAGAATCTCCGTATtg  <  1:5151067/100‑1 (MQ=255)
                                                                                               |                                                                  
CCAGAATCAACATTGAAATAATTACTTCCAAACGATTTCTCGCTCAACATTGGTTCCTCATTGATGACAACACTTTTTGCTTGCATATCTATTTTTACTAAATCACCTTTTTGTATAATGACATCCCTTGCGCCTTTCGGTTTTGGTAGAATCTCCGTATTG  >  NC_007793/2095370‑2095531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑