| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,094,784 | A→G | S166S (AGT→AGC) | SAUSA300_RS10580 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,094,784 | 0 | A | G | 100.0% | 34.0 / NA | 14 | S166S (AGT→AGC) | SAUSA300_RS10580 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (7/7); total (7/7) | |||||||||||
TAACCCAACCAAATCTTTACCATACTCAATTTCTTTACCTTTGAATAAGCTGTTTTTCTTTTTGAGTACCACATATCTACCTTTGACGGTATTAGAACTAAGCTCTATATAAAAATCCAATACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGATAAGAAGTCCATGACGTAGT > NC_007793/2094688‑2094879 | tAACCCGACTAAATCTTTACCATATTCAATTTCTTTACCTTTGAATAAGCTGTTTTTCTTTTTGAGTACTACATATCTACCTTTGACGGTATTAGAGCTa < 1:450721/100‑1 (MQ=255)tAACCCGACTAAATCTTTACCATATTCAATTTCTTTACCTTTGAATAAGCTGTTTTTCTTTTTGAGTACTACATATCTACCTTTGACGGTATTAGAGCTa > 1:4666841/1‑100 (MQ=255) aCCATATTCAATTTCTTTACCTTTGAATAAGCTGTTTTTCTTTTTGAGTACTACATATCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATct < 1:4031893/100‑2 (MQ=255) gAATAAGCTGTTTTTCTTTTTGAGTACTACATATCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACAt < 1:137892/100‑1 (MQ=255) aTAAGCTGTTTTTCTTTTTGAGTACTACATATCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACagca < 1:4221504/100‑4 (MQ=255) cTGTTTTTCTTTTTGAGTACTACATATCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCt < 1:890169/100‑1 (MQ=255) tacaTATCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGtt > 1:2850016/2‑100 (MQ=255) acaTATCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGttt > 1:3863110/1‑100 (MQ=255) tatCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGAt < 1:3092827/100‑1 (MQ=255) atCTACCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGATa > 1:820173/1‑100 (MQ=255) aCCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGATaagaa > 1:1834162/1‑100 (MQ=255) aCCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGATaagaa > 1:1888988/1‑100 (MQ=255) aCCTTTGACGGTATTAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGATaagaa > 1:582749/1‑100 (MQ=255) tAGAGCTAAGCTCAATATAAAAATCTAAAACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGATAAGAAGTCCATGACgtagt < 1:398918/100‑1 (MQ=255) | TAACCCAACCAAATCTTTACCATACTCAATTTCTTTACCTTTGAATAAGCTGTTTTTCTTTTTGAGTACCACATATCTACCTTTGACGGTATTAGAACTAAGCTCTATATAAAAATCCAATACCATTTTATAGGTTGTACATAATTGCTTTAAAACTTCATATCTAGTTTGATAAGAAGTCCATGACGTAGT > NC_007793/2094688‑2094879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |