| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,094,634 | G→A | P216P (CCC→CCT) | SAUSA300_RS10580 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,094,634 | 0 | G | A | 100.0% | 33.3 / NA | 13 | P216P (CCC→CCT) | SAUSA300_RS10580 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (7/6); total (7/6) | |||||||||||
TATCCCCCAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTTCCTTTGTCATTTTCGGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCAACCAAATCTTTACCATACTCAATTTCTTTACCTT > NC_007793/2094541‑2094728 | tatCCCCCAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTccc < 1:5358958/100‑1 (MQ=255) ccAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCa < 1:3144824/100‑1 (MQ=255) ccAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCa > 1:5344354/1‑100 (MQ=255) tcaggtgcATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTaa > 1:2473199/7‑100 (MQ=255) cgatctCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGt < 1:5592390/95‑1 (MQ=255) aaaCGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCAt > 1:3390532/1‑100 (MQ=255) aaaCGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCAt < 1:4182152/100‑1 (MQ=255) aaaCGCTTCCCTTTGTCATTTTCAGATCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCAt < 1:4751712/100‑1 (MQ=255) ccctacgTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCATATTCAAtt > 1:2573124/7‑100 (MQ=255) cccTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCATATTCAAtt > 1:3159980/2‑100 (MQ=255) cccTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCATATTCAAtt > 1:322442/2‑100 (MQ=255) cccTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCATATTCAAtt > 1:3566925/2‑100 (MQ=255) ttttCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCATATTCAATTTCTTTACCtt < 1:2438474/100‑1 (MQ=255) | TATCCCCCAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTTCCTTTGTCATTTTCGGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCAACCAAATCTTTACCATACTCAATTTCTTTACCTT > NC_007793/2094541‑2094728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |