Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,094,619 T→C G221G (GGA→GGG)  SAUSA300_RS10580 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,094,6190TC100.0% 18.6 / NA 9G221G (GGA→GGG) SAUSA300_RS10580hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (4/5);  total (4/5)

GATTGTGGTTCATATATCCCCCAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTTCCTTTGTCATTTTCGGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCAACCAAATCTTTACCAT  >  NC_007793/2094527‑2094710
                                                                                            |                                                                                           
gATTGTGGTTCATATATCCCCCAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTAGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGt                                                                                      >  1:4779016/1‑100 (MQ=255)
              tatCCCCCAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTccc                                                                        <  1:5358958/100‑1 (MQ=255)
                    ccAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCa                                                                  <  1:3144824/100‑1 (MQ=255)
                    ccAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCa                                                                  >  1:5344354/1‑100 (MQ=255)
                         tcaggtgcATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTaa                                                             >  1:2473199/7‑100 (MQ=255)
                                                             cgatctCTGTCACAACTAGCTCTAAACGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGt                         <  1:5592390/95‑1 (MQ=255)
                                                                                    aaaCGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCAt  >  1:3390532/1‑100 (MQ=255)
                                                                                    aaaCGCTTCCCTTTGTCATTTTCAGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCAt  <  1:4182152/100‑1 (MQ=255)
                                                                                    aaaCGCTTCCCTTTGTCATTTTCAGATCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCGACTAAATCTTTACCAt  <  1:4751712/100‑1 (MQ=255)
                                                                                            |                                                                                           
GATTGTGGTTCATATATCCCCCAAATATAGCGCATAGGTAGGTTGAATTGACTTTGCGCTTCGTCATCTGTCACAACTAGCTCTAAACGCTTTCCTTTGTCATTTTCGGGTCCCACAGCAATTAATGCTGTTTTGATTTCTGACATATCAATCTTCCTAGTTAACCCAACCAAATCTTTACCAT  >  NC_007793/2094527‑2094710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑