| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,088,151 | G→A | intergenic (‑415/+274) | SAUSA300_RS10535 ← / ← SAUSA300_RS10540 | peptidoglycan hydrolase/staphylokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,088,151 | 0 | G | A | 99.0% | 294.1 / NA | 101 | intergenic (‑415/+274) | SAUSA300_RS10535/SAUSA300_RS10540 | peptidoglycan hydrolase/staphylokinase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (15/85); total (15/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
CTCTATCATAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAGCCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCTAGAAAGATTATAACATAAAAAAATAGGCAAG > NC_007793/2088055‑2088235 | ctctATCATAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAAccc > 1:5164406/1‑100 (MQ=255) gatctagtAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCg < 1:3709865/93‑1 (MQ=255) ctATCATAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGa > 1:5294834/1‑100 (MQ=255) gaTCTTAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAAcccagg < 1:3760729/99‑4 (MQ=255) cATAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCAGatcgg > 1:1166423/1‑96 (MQ=255) ttAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:3242181/99‑1 (MQ=255) ttAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:2077234/99‑1 (MQ=255) gtAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:3045798/99‑1 (MQ=255) gtAAGAAAAAACACCCAGTGACATGCTGGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:2197037/99‑1 (MQ=255) aTAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:4819814/100‑1 (MQ=255) aTAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:4473279/100‑1 (MQ=255) aTAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:3954043/100‑1 (MQ=255) aTAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:2960891/100‑1 (MQ=255) aTAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:2611464/100‑1 (MQ=255) aTAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAAGAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagct < 1:5578244/100‑1 (MQ=255) aaGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTACCACATCATAACAAAAAACTAACCCGAAagctag < 1:809258/100‑1 (MQ=255) aaGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctag < 1:4045496/100‑1 (MQ=255) aaGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctag < 1:488780/100‑1 (MQ=255) aaGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctag < 1:2010927/100‑1 (MQ=255) aGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagt < 1:711800/100‑2 (MQ=255) aGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagg < 1:5387308/100‑2 (MQ=255) aGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagg < 1:4174930/100‑2 (MQ=255) aGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagc < 1:2125656/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:3342798/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:348666/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:5634693/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:3194054/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:5153445/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:1761130/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:586968/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:2931271/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:3367954/100‑1 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagca < 1:5143864/100‑2 (MQ=255) gAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTCGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAagctagct < 1:5215183/100‑1 (MQ=255) aaaaaaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAGCTAACCCGAAagctagctg < 1:121871/100‑2 (MQ=255) aaaaaaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAgctagcta < 1:4296919/100‑1 (MQ=255) aaaaaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAgctagctag < 1:473032/100‑2 (MQ=255) aaaaaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCtat < 1:4507168/100‑1 (MQ=255) aaaaaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCtat < 1:2656283/100‑1 (MQ=255) aaaaaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCtat < 1:2112519/100‑1 (MQ=255) aaaaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAGTAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCtatg < 1:1864049/100‑2 (MQ=255) aaCACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATaaa < 1:3407650/100‑2 (MQ=255) cacCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACAt < 1:4969976/100‑1 (MQ=255) aGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAAt < 1:5544951/100‑1 (MQ=255) gTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGCAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATc > 1:289381/1‑100 (MQ=255) tGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCt < 1:4120289/100‑1 (MQ=255) gACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTa > 1:162136/1‑100 (MQ=255) gACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTa > 1:5353393/1‑100 (MQ=255) gACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTa < 1:3645499/100‑1 (MQ=255) gCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAg > 1:4157757/1‑100 (MQ=255) ggTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATTTAAAAAGatcgg > 1:2934311/1‑96 (MQ=255) gTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTcg < 1:699144/100‑2 (MQ=255) gTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTcc > 1:1634981/1‑100 (MQ=255) tGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATTTAAAAAGatcggaa > 1:3648227/1‑94 (MQ=255) tGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTccc < 1:2768948/100‑1 (MQ=255) tGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTccc > 1:4576954/1‑100 (MQ=255) gAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCt < 1:4917926/100‑1 (MQ=255) taCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCtt < 1:2884803/99‑1 (MQ=255) aaCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTcccat < 1:3750505/100‑3 (MQ=255) aaCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTcccag < 1:2690551/100‑3 (MQ=255) aaCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCtt < 1:3695736/100‑1 (MQ=255) aaCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCtt < 1:2435586/100‑1 (MQ=255) aaCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCtt < 1:5152495/100‑1 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCttt < 1:2968605/100‑2 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCttt < 1:1204661/100‑2 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTg < 1:3255611/100‑1 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTg < 1:670577/100‑1 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTg < 1:657456/100‑1 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTg < 1:5486264/100‑1 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTg < 1:1483478/100‑1 (MQ=255) aCAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTg < 1:3546776/100‑1 (MQ=255) cAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAGCCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGa < 1:3304838/100‑1 (MQ=255) cAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGa < 1:5238317/100‑1 (MQ=255) cAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTAGa < 1:5003239/100‑1 (MQ=255) aaGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTgta < 1:2761152/100‑3 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTgcac < 1:5184079/100‑4 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAAt < 1:166823/100‑1 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAAt < 1:3286611/100‑1 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAAt < 1:157787/100‑1 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAAt < 1:5338080/100‑1 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAAt < 1:3871097/100‑1 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAAt < 1:5164013/100‑1 (MQ=255) aGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAAt < 1:3423334/100‑1 (MQ=255) ggATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATa < 1:3286336/100‑1 (MQ=255) gATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGatgtg < 1:4278091/100‑5 (MQ=255) aTAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACg < 1:2472010/100‑1 (MQ=255) tAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGt < 1:2717368/100‑1 (MQ=255) tAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGt < 1:1715867/100‑1 (MQ=255) tAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAACCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGt < 1:3769679/100‑1 (MQ=255) aGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGtt < 1:3698580/100‑2 (MQ=255) aGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGta < 1:2710186/100‑2 (MQ=255) aGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGta < 1:1204206/100‑2 (MQ=255) gATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCt < 1:3027920/100‑1 (MQ=255) gtGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCtg < 1:2781522/99‑2 (MQ=255) tGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCtgc < 1:46964/100‑3 (MQ=255) aaCACATCATAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCTAGAAAGATTATAACATAAAAAAAt > 1:3987428/1‑100 (MQ=255) gcatcatAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCTAGAAAGATTATAACATAAAAAAATAgg > 1:2253940/2‑100 (MQ=255) catcatAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCTAGAAAGATTATAACATAAAAAAATAGGc < 1:4114757/100‑1 (MQ=255) atcatAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCTAGAAAGATTATAACATAAAAAAATAGGCa > 1:4021477/1‑100 (MQ=255) catAACAAAAAACTAACCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCTAGAAAGATTATAACATAAAAAAACAGGCAAg > 1:1092063/1‑100 (MQ=255) | CTCTATCATAAGAAAAAACACCCAGTGACATGCTTGGGTGAACAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAGCCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGAATACGTCTAGAAAGATTATAACATAAAAAAATAGGCAAG > NC_007793/2088055‑2088235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |