D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,085,973	T→A	Q80L (CAA→CTA)	SAUSA300_RS10525 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,085,973	0	T	A	99.9%	12944.6 / NA	4251	Q80L (CAA→CTA)	SAUSA300_RS10525	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/5); new base A (24/4220); total (24/4227)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 4255 total aligned reads displayed.

GCTTCGTCAATTTCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTTGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACATTTAGTTCATCTAATAACGATTTTAATTCAT  >  NC_007793/2085880‑2086069

 cttccgatctttCGTCATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGa                                                                                           <  1:1949912/91‑1 (MQ=255)

  ccgatctaTTTCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGag                                                                                          <  1:3779213/93‑2 (MQ=255)

         aTTACGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAAttttat                                                                                   <  1:5216452/100‑3 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:1046218/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:4705160/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:4751283/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:2763579/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:4936418/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:2424763/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:5107266/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:5168240/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:1882549/100‑1 (MQ=255)

          tttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:5753260/100‑1 (MQ=255)

          tttCATTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:2104277/100‑1 (MQ=255)

          tttCATTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:1435586/100‑1 (MQ=255)

          ttacGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:3233729/97‑1 (MQ=255)

          tctCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:2379776/98‑1 (MQ=255)

          gtccGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:597940/97‑1 (MQ=255)

          cttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:5551726/99‑1 (MQ=255)

          cttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:2976928/99‑1 (MQ=255)

          cttCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:4839826/99‑1 (MQ=255)

          cttCATTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:537338/99‑1 (MQ=255)

          cgtCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:1334399/98‑1 (MQ=255)

          ccgcGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:271307/97‑1 (MQ=255)

          attCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAATCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTtat                                                                                  <  1:2659361/99‑1 (MQ=255)

                  taAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCt                                                                          <  1:4595487/100‑1 (MQ=255)

                   aaaTCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCtt                                                                         <  1:5603604/100‑1 (MQ=255)

                      tCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTtata                                                                      <  1:4123416/100‑1 (MQ=255)

                      tCTTTTGAAGTTGATATTTTGCCTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTtata                                                                      <  1:5642564/100‑1 (MQ=255)

                        ttttGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTataat                                                                    <  1:5044435/100‑1 (MQ=255)

                         tttGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTataata                                                                   <  1:1586539/100‑1 (MQ=255)

                           tGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTtatagcggg                                                                 <  1:1004923/100‑6 (MQ=255)

                            gAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAgt                                                                <  1:3468249/100‑1 (MQ=255)

                             aaGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAgtt                                                               <  1:1379922/100‑2 (MQ=255)

                               gTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGtt                                                             <  1:4374542/100‑1 (MQ=255)

                                ttGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGttt                                                            <  1:447632/100‑1 (MQ=255)

                                ttGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGttt                                                            <  1:2166042/100‑1 (MQ=255)

                                  gATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTaa                                                          <  1:2529055/100‑1 (MQ=255)

                                  gATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTaa                                                          <  1:1736050/100‑1 (MQ=255)

                                        ttGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTcc                                                    <  1:767654/100‑1 (MQ=255)

                                        ttGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTcc                                                    <  1:5685803/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGATGTTTTTATTGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:5424981/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:465723/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:3284686/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:4065119/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:4022843/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:3521159/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:2266096/100‑1 (MQ=255)

                                           cTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGAACTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGt                                                 <  1:1280236/100‑1 (MQ=255)

                                             tCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTat                                               <  1:385691/100‑2 (MQ=255)

                                              cTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAgt                                              <  1:3911946/100‑2 (MQ=255)

                                               tGACCTTTTCTTAAAGTCTTTTGTCTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTAAAATAAGTGTTTAAACTTCCAGTAGcc                                             <  1:3564303/100‑2 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATATTAAGTGTTTAAACTTCCAGTAGCt                                             <  1:3730424/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGcc                                             <  1:1837794/100‑2 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGca                                             <  1:3625765/100‑2 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGca                                             <  1:3410995/100‑2 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:1794778/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:1119143/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:4215920/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:5485684/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:1683000/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:4990253/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:1530735/100‑1 (MQ=255)

                                               tGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCt                                             <  1:2820820/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCtg                                            <  1:4262604/100‑2 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:3015468/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:5321920/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:5253746/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:220988/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:2575159/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:4891806/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:287491/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:292445/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:714765/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:3117014/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:4318932/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:86527/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:3816081/100‑1 (MQ=255)

                                                gACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTGTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTa                                            <  1:4160235/100‑1 (MQ=255)

                                                 aCATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTaa                                           <  1:163994/100‑1 (MQ=255)

                                                 aCATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTaa                                           <  1:4540787/100‑1 (MQ=255)

                                                  cATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTacg                                          <  1:3968628/100‑3 (MQ=255)

                                                  cATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTaag                                          <  1:1182595/100‑2 (MQ=255)

                                                   aTTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTaaag                                         <  1:952131/100‑3 (MQ=255)

                                                   aTTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAAtt                                         <  1:1492/100‑1 (MQ=255)

                                                   aTTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAAtg                                         <  1:3172561/100‑2 (MQ=255)

                                                    ttttCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTc                                        <  1:2621103/100‑1 (MQ=255)

                                                    ttttCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTc                                        <  1:819457/100‑1 (MQ=255)

                                                       tCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCAta                                     <  1:1238706/100‑2 (MQ=255)

                                                        cTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCagag                                    <  1:4427004/100‑4 (MQ=255)

                                                        cTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTa                                    <  1:663496/100‑1 (MQ=255)

                                                         ttAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTaa                                   <  1:3337275/100‑1 (MQ=255)

                                                             aGTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACAtt                               <  1:2465765/100‑1 (MQ=255)

                                                              gTCTTTTGACTTAAGAGCTTACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACAttt                              <  1:2003455/100‑1 (MQ=255)

                                                              gTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACAttt                              <  1:2060130/100‑1 (MQ=255)

                                                              gTCTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACAttt                              <  1:911824/100‑1 (MQ=255)

                                                                cTTTTGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACATTTAg                            <  1:3069738/100‑1 (MQ=255)

                                                                   ttGACTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACATTTAGTTc                         <  1:3679075/100‑1 (MQ=255)

                                                                      aCTTAAGAGCATACATTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACATTTAGTTCagg                      <  1:4804589/100‑3 (MQ=255)

                                                                                    aTTGCTTTTAGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACATTTAGTTCATCTAATAACGATTTTa        <  1:2324284/100‑1 (MQ=255)

GCTTCGTCAATTTCGTTATAAATCTTTTGAAGTTGATATTTTGCTTCTGACATTTTCTTAAAGTCTTTTGACTTAAGAGCATACATTGCTTTTTGACCTGAAATTTTTATAGTTCGCTTATAATAAGTGTTTAAACTTCCAGTAGCTAATTCATTAACATTTAGTTCATCTAATAACGATTTTAATTCAT  >  NC_007793/2085880‑2086069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`