| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,957,984 | A→T | intergenic (‑745/‑138) | SAUSA300_RS09685 ← / → SAUSA300_RS09690 | gamma‑hemolysin subunit A/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,957,984 | 0 | A | T | 100.0% | 22.6 / NA | 10 | intergenic (‑745/‑138) | SAUSA300_RS09685/SAUSA300_RS09690 | gamma‑hemolysin subunit A/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (0/10); total (0/10) | |||||||||||
TTTATATTATAATATAAATATTTTATTTTTCAATACTTAATTTCAAAAATCCCCTATGAAAATGTTGATGAGCTACATCTTTAAATCTTATTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGCGTATGCATCTCACCTATCTTTTTTGCTTT > NC_007793/1957895‑1958074 | tttatATTATAATATAAATATTTTATTTTTCAATACTTAATTTTAAAAATCCCCTATGAAAATGTTGATGAGCTACATCTTTAAATCTTTTTATACATTg < 1:2537024/100‑1 (MQ=255) ccTATGAAAATGTTGATGAGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTgtg < 1:4281456/100‑3 (MQ=255) tGTTGATGAGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCAtctc < 1:811230/100‑1 (MQ=255) gatgaGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCATCTCACCt < 1:1635120/100‑1 (MQ=255) tgaGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCATCTCACCTag < 1:3757817/100‑2 (MQ=255) tgaGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCATCTCACCTAt < 1:5188193/100‑1 (MQ=255) gaGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCATCTCACCTAta < 1:3694810/100‑2 (MQ=255) gaGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCATCTCACCTAta < 1:5671949/100‑2 (MQ=255) gaGCTACATCTTTAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCATCTCACCTATc < 1:5347069/100‑1 (MQ=255) ttAAATCTTTTTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGTGTATGCATCTCACCTATCTTTTTTGCttt < 1:4032719/100‑1 (MQ=255) | TTTATATTATAATATAAATATTTTATTTTTCAATACTTAATTTCAAAAATCCCCTATGAAAATGTTGATGAGCTACATCTTTAAATCTTATTATACATTGTATAAAATTATATTGCGAGGTAGTAAATTGATATTATACACTTTTGGTTGCGTATGCATCTCACCTATCTTTTTTGCTTT > NC_007793/1957895‑1958074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |