| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,944,161 | A→G | L55P (CTC→CCC) | SAUSA300_RS09625 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,944,161 | 0 | A | G | 100.0% | 15.1 / NA | 8 | L55P (CTC→CCC) | SAUSA300_RS09625 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (5/3); total (5/3) | |||||||||||
TGTATGTATGAGTATATTTGGAACTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGAGATCAGATTTTGCGATTTTGCCTTGGATAGAGTAGTTGCGATTTGTAAATACGTTTTTCAGGTTCGATTCAATTTCGTTGTTAAGATAA > NC_007793/1944069‑1944250 | tgtatgtaTGAGTATATTTGGAACTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGGGATCAga > 1:4814674/1‑100 (MQ=255) gtatgtatGAGTATATTTGGAACTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGGGATCAgat > 1:2985306/1‑100 (MQ=255) gtatgtatGAGTATATTTGGAACTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGGGATCAgat > 1:5294465/1‑100 (MQ=255) gtatgtatGAGTATATTTGGAACTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGGGATCAgat > 1:804795/1‑100 (MQ=255) aGTATATTTGGAACTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGGGATCAgattttgcgtcg < 1:1899407/100‑4 (MQ=255) aaCTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGGGATCAGATTTTGCGATTTTGCCTTGGAt < 1:3691614/100‑1 (MQ=255) aTTGTTAATTATTGTAGTGGTTTGAATTATGGATGTTTTTTCGAGATATATTATTGCGGGGATCAGATTTTGCGATTTTGCCTTGGATAGAGTAGTTGCg < 1:1953139/100‑1 (MQ=255) gTTATTTCGGGGATCAGATTTTGCGATTTTGCCTTGGATAGAGTAGTTGCGATTTGTAAATACGTTTTTCAGGTTCGATTCAATTTCGTGGATAAGatcg > 1:4409383/1‑98 (MQ=255) | TGTATGTATGAGTATATTTGGAACTAGTAATGTATTGTTAAATATTGAAGATGATTGAATTATGGAATTTTTTTCGAGATATGTTATTTCGGAGATCAGATTTTGCGATTTTGCCTTGGATAGAGTAGTTGCGATTTGTAAATACGTTTTTCAGGTTCGATTCAATTTCGTTGTTAAGATAA > NC_007793/1944069‑1944250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |