D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,789,690	G→A	I11I (ATC→ATT)	SAUSA300_RS08915 ←	dephospho‑CoA kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,789,690	0	G	A	99.9%	2123.7 / NA	686	I11I (ATC→ATT)	SAUSA300_RS08915	dephospho‑CoA kinase
Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (6/679); total (6/680)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01

Only 100 of 687 total aligned reads displayed.

TCCCCTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCGATTCCACCTGTTAGACCAATAACTTTCGGCATAATTTCACTCTTTCTTTATTTTTGACATACTGGACAATAATGACTATTTCTTGTCGCGATGAT  >  NC_007793/1789593‑1789785

tCCCCTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAAt                                                                                               <  1:3204370/100‑1 (MQ=255)

tCCCCTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAAt                                                                                               <  1:588546/100‑1 (MQ=255)

tCCCCTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAAt                                                                                               <  1:2296285/100‑1 (MQ=255)

 ccccTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTCCTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAAta                                                                                              <  1:3588828/100‑2 (MQ=255)

 ccccTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGGTAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAAtt                                                                                              >  1:4860208/1‑100 (MQ=255)

  cccTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTGCTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAAtta                                                                                             <  1:1282622/100‑2 (MQ=255)

        ttAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTcctcctt                                                                                       <  1:1415851/100‑2 (MQ=255)

         tAACAGCTTCCCTGGCTGCTTTATCATCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGt                                                                                      <  1:1853047/100‑1 (MQ=255)

         tAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGt                                                                                      <  1:5572639/100‑1 (MQ=255)

          ctcttccgatcTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:863321/90‑1 (MQ=255)

          ctcttccgatcTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1986403/90‑1 (MQ=255)

          ctcttccgatcTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1968539/90‑1 (MQ=255)

          ccgatcTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1154841/95‑1 (MQ=255)

          aaCAGTTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2128752/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTTCTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2170373/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTGCTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:502256/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAATCCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCTCCTGtt                                                                                     <  1:3090732/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAATCCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3343892/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCGCCTGtt                                                                                     <  1:4885016/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3559625/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4086280/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3997725/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3972229/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:382418/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3762807/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:785020/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4340314/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3512680/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3398240/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3282290/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:902969/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4152667/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:418318/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4395405/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4601333/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:5761533/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4663911/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4774826/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:104708/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:5667265/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:5505035/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:529397/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4932421/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:5075089/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:4974592/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3239917/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2086374/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2042600/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1942067/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1798305/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2263629/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2379523/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2463150/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1541562/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:256572/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1469077/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2795171/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1243632/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:1217097/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:113071/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:3023430/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2982195/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2944216/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCTTTAACAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:2655091/100‑1 (MQ=255)

          aaCAGCTTCCCTGGCTGCGTTATCAGCATCTACTACTGTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGtt                                                                                     <  1:5368758/100‑1 (MQ=255)

          aaCAGCTGCCCTGGCTGCTTTATCATCATCTACTTCTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTGCCTGAGGCAATTCCACCTGtt                                                                                     <  1:5546577/100‑1 (MQ=255)

            cAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAg                                                                                   <  1:2757373/100‑1 (MQ=255)

            cAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAg                                                                                   <  1:1618983/100‑1 (MQ=255)

               ctccccTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:4464452/97‑1 (MQ=255)

               cTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:2217725/100‑1 (MQ=255)

               cTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:1692024/100‑1 (MQ=255)

               cTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:703222/100‑1 (MQ=255)

               cTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:5331849/100‑1 (MQ=255)

               cTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:132858/100‑1 (MQ=255)

               cTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:4715414/100‑1 (MQ=255)

               cTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTGCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGAcc                                                                                <  1:242946/100‑1 (MQ=255)

                ttCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCa                                                                               <  1:685574/100‑1 (MQ=255)

                ttCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCa                                                                               <  1:1766305/100‑1 (MQ=255)

                ttCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCa                                                                               <  1:5152425/100‑1 (MQ=255)

                ttCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCa                                                                               <  1:5417552/100‑1 (MQ=255)

                ttCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCa                                                                               <  1:4816778/100‑1 (MQ=255)

                ttCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCa                                                                               <  1:2524382/100‑1 (MQ=255)

                cgatcTGGGTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCa                                                                               <  1:3889338/96‑1 (MQ=255)

                 tCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCac                                                                              <  1:5245114/100‑2 (MQ=255)

                 tCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCaa                                                                              <  1:2320820/100‑1 (MQ=255)

                   ccTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATa                                                                            <  1:5706226/100‑1 (MQ=255)

                            tttATCAGCATCTACTCCTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGc                                                                   <  1:3122247/100‑1 (MQ=255)

                            tttATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGc                                                                   <  1:2872495/100‑1 (MQ=255)

                            tttATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGc                                                                   <  1:368160/100‑1 (MQ=255)

                              tATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATATTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCAt                                                                 <  1:4513034/100‑1 (MQ=255)

                              tATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCAt                                                                 <  1:3702990/100‑1 (MQ=255)

                               aTCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCGCCTGTTAGACCAATAACTTTCGGCATa                                                                <  1:808188/100‑1 (MQ=255)

                               aTCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCaat                                                                <  1:4274514/100‑3 (MQ=255)

                                 cAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCATacc                                                              <  1:3731859/100‑3 (MQ=255)

                                        tactacTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCATAATTTCActg                                                       <  1:5476256/100‑2 (MQ=255)

                                             ctTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCATAATTTCACtctttct                                                  <  1:1008782/100‑1 (MQ=255)

                                                                   gagTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATATCTTTCGGCATAATTTCACTCTTTCTTTATTTTTGACATACTGGACat                            <  1:315907/100‑2 (MQ=255)

                                                                    agTTCTGATACTGTTGATTTTCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCATAATTTCACTCTTTCTTTATTTTTGACATACTGGACaat                           <  1:2695926/100‑1 (MQ=255)

                                                                                     ttttCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCATAATTTCACTCTTTCTTTATTTTTGACATACTGGACAATAATGACTATTTCTTGtg          <  1:1182117/100‑2 (MQ=255)

                                                                                        tCCTGAGGCAATTCCACCTGTTAGACCAATAACTTTCGGCATAATTTCACTCTTTCTTTATTTTTGACATACTGGACAATAATGACTATTTCTTGTcgcg       <  1:955779/100‑1 (MQ=255)

TCCCCTTTTTAACAGCTTCCCTGGCTGCTTTATCAGCATCTACTACTTTAAAACCGAATACGGATAAGAGTTCTGATACTGTTGATTTTCCTGAGGCGATTCCACCTGTTAGACCAATAACTTTCGGCATAATTTCACTCTTTCTTTATTTTTGACATACTGGACAATAATGACTATTTCTTGTCGCGATGAT  >  NC_007793/1789593‑1789785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`