| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,693,739 | T→C | T145A (ACA→GCA) | SAUSA300_RS08410 ← | coproporphyrinogen III oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,693,739 | 0 | T | C | 100.0% | 16.2 / NA | 8 | T145A (ACA→GCA) | SAUSA300_RS08410 | coproporphyrinogen III oxidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (0/8); total (0/8) | |||||||||||
CCATATCTAAAGCTAGATCTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGTGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCTTGA > NC_007793/1693643‑1693819 | ccATATCTAAAGCTAGATCTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGtt < 1:3920626/100‑1 (MQ=255) tttCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTa < 1:5107094/100‑1 (MQ=255) cGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCt < 1:2057199/100‑1 (MQ=255) ggTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTa < 1:1747147/100‑1 (MQ=255) ggTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTa < 1:634975/100‑1 (MQ=255) aaaCTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCt < 1:3314823/100‑1 (MQ=255) aaaCTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCt < 1:5329597/100‑1 (MQ=255) cTGATTGATTTAATACCTGCGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCTTGa < 1:1755361/100‑1 (MQ=255) | CCATATCTAAAGCTAGATCTAAACTTTGTTCAAAATCTTCAATCGTCTGTTTCGGTAAATGATACATTAAATCTAAACTGATTGATTTAATACCTGTGTTTTTAGCATTTAACACCGAAGTGTAAATATCTTCAGTATTGTGCGTTCTACCTAAAACAGACAATAACTCCGGCTTGA > NC_007793/1693643‑1693819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |