D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,673,084	C→A	E448* (GAA→TAA)	SAUSA300_RS08305 ←	DNA primase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,673,084	0	C	A	80.3%	241.1 / 68.0	225	E448* (GAA→TAA)	SAUSA300_RS08305	DNA primase
Reads supporting (aligned to +/- strand): ref base C (4/38); new base A (0/171); total (4/221)
Fisher's exact test for biased strand distribution p-value = 1.34e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.96e-02

Only 100 of 244 total aligned reads displayed.

ATGTATCTTTATCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTCAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAA  >  NC_007793/1672985‑1673178

tgctcttccgaTCTCTCTCTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:2884724/90‑1 (MQ=255)

tgctcttccgaTCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:2911479/90‑1 (MQ=255)

tgctcttccgaTCTCTCATAAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:3347784/90‑1 (MQ=255)

tgctcttccgaTCTCTCAGTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:2005928/90‑1 (MQ=255)

tgctcttccgaTCTCTCAATAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:4375167/90‑1 (MQ=255)

aTGTATCTTTATCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:2733594/100‑1 (MQ=255)

aTGTATCTTTATCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:3091665/100‑1 (MQ=255)

aTGTATCTTTATCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTc                                                                                                   <  1:1203161/100‑1 (MQ=255)

 tGTATCTTTATCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTCa                                                                                                  <  1:4490289/100‑1 (MQ=255)

 tGTATCTTTATCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTCa                                                                                                  <  1:1219831/100‑1 (MQ=255)

   tcttccgaTCTCTC‑TTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTCAA‑Tg                                                                                              <  1:3246225/93‑1 (MQ=255)

              ctcATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTCAA‑TG‑T‑AACCGCCAt                                                                                  >  1:3311163/1‑100 (MQ=255)

                          ttaaaaaaTCCTCCCTCCTT‑TTTTTT‑T‑TGCCGGCTAAAATTGAAAATT‑G‑GTCCAAAACCAATG‑GGCTCAGGTTAAA‑TG‑T‑AACCGCCATACTCAtccacac                                                                      <  1:2414796/97‑6 (MQ=255)

                           taaaaaaTGCGCTCTGCGT‑TTTTTC‑T‑TGACGGCTGAATTTATAAAAT‑T‑GGGCCATACCATTT‑GGCTCGGGTTAAT‑TT‑T‑AACCGCCATACTCATCTTCTgg                                                                     <  1:1296353/98‑1 (MQ=255)

                             aaaaaTCTTCCCCCCGT‑TTTTTT‑T‑TGACGTTTAAATGTGTAAATT‑T‑GGGCCATACCAATG‑GTTTTATTTTAAT‑TA‑T‑AACCGCCATACTCATCTTCTGGat                                                                   <  1:3867139/100‑1 (MQ=255)

                             aaaaaTCCTCGCCCCGT‑TTTTTC‑T‑TGACGCCTAAATTTGTAAAAT‑T‑GGGCCATCCCAATT‑GGCTAAGTTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGat                                                                   <  1:790568/100‑1 (MQ=255)

                             aaaaaGGCTCCCCCCGT‑TTTTTT‑T‑GGCCGGCTAAAATTGAAAAAT‑T‑GTGCCATCCAAATT‑GGCTCAGGTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGat                                                                   <  1:4074293/100‑1 (MQ=255)

                              aaaaTGCTCTCCCCTC‑TTTTTC‑T‑GGCCGTCT‑AAATTTTTAAAT‑TGGTGCCTTACCATTG‑GGCTTGGTTTAAG‑TG‑T‑ACCCGCCATACTCATCTTCTGGata                                                                  <  1:1844919/100‑1 (MQ=255)

                              aaaaTGCTCGCTCCTT‑TTTTTT‑T‑TGACGGCTAAATTTGTAAATT‑T‑GTCCCATACCAATG‑GGCTCAGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGata                                                                  <  1:4866847/100‑1 (MQ=255)

                              aaaaTCCTCGCTCCGC‑TTTTTC‑T‑GACCGGCTAAAATTGTAAATT‑T‑GGGCCATACAATTG‑GGCGAGGGTAAAA‑TT‑A‑AACCGCCATACTCATCTTCTGGata                                                                  <  1:988647/100‑1 (MQ=255)

                               cacctctcgctcTTC‑TTTTTC‑T‑GGCCGGCGTAATTTTTCAAAT‑T‑GTGCCATACCAATG‑GGCTGGGTTTGAA‑TA‑T‑AGCCGCCATACTCATCTTCTggcctt                                                                 <  1:4632823/95‑5 (MQ=255)

                               aattGCCCGCTCCGT‑TTTTTC‑T‑TGCCGCCTAATTTTGTAAAGT‑T‑GGCCCATACAATTG‑GGCGCGGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTgccatt                                                                 <  1:4445734/97‑6 (MQ=255)

                                aaTGCTCGCTCCGT‑TTTTTT‑T‑GGACGGCTAAAATTGTAAAAT‑T‑GGGCAATACAATTG‑GGCTAGGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTgggcatc                                                                <  1:1799295/100‑6 (MQ=255)

                                 aTGCTCGCTCCTT‑TTTTTC‑T‑TGGCGCCTAAATTTATAAAAT‑T‑GTCCCATCCCAATT‑GGCTCAGTTAAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGataata                                                               <  1:5096324/100‑1 (MQ=255)

                                  ctcccgctcCCCTTTTTTCTT‑TGGCGGCAAAAATTGCCAATT‑T‑GTGCAATACAATTG‑GGCTCGGGTCCAA‑TG‑T‑AACCGCCATACTCATCTTCTGGataat                                                                <  1:3728741/96‑1 (MQ=255)

                                        ctcCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTCAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCt                                                        >  1:1948384/1‑100 (MQ=255)

                                        ccccGT‑TTTTTG‑T‑GGGCGGCTCAATTTATAAAGT‑T‑GTGCAATAACATGG‑GACCCAGGTAAAA‑TA‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCt                                                        <  1:5267846/98‑1 (MQ=255)

                                        ccccGC‑TTTTTT‑TGTGACGGCCCAAATTTACAATT‑T‑GTCCCATCCCACTG‑GGCT‑AGGTTTAATTG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGc                                                         <  1:5044056/98‑1 (MQ=255)

                                         ttcttttttttC‑T‑GGACGGCAAAATTTTTAAATT‑T‑GGGCCATACAATTT‑GGCTAAGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCt                                                        <  1:5638313/94‑1 (MQ=255)

                                         tctgtttttttC‑T‑TGGCGGCACAAATTAAAAATT‑T‑GTGCCATACAAATG‑GGGACGGTTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCt                                                        <  1:3144944/94‑1 (MQ=255)

                                         ctcctttttttC‑T‑GGCCGGCTAAATTTGTCAATT‑T‑GTCCCTTCCCATTT‑GGCTAGGTTTAAA‑TT‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCt                                                        <  1:3015399/94‑1 (MQ=255)

                                         ctcctttttttC‑T‑GGACGGCTAAATTTGTAAATT‑T‑GTTTTATACAAATT‑GGCTCGGGTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCt                                                        <  1:3581438/94‑1 (MQ=255)

                                         cccttttttttt‑t‑tGCCGGCTAAAATGGGAAATT‑T‑TGGCAATATAAATT‑GCTTTGGGTTAAA‑TG‑G‑AACCGCCATACTCATCTTCTGGATAATAATTGGCt                                                        <  1:2210778/94‑1 (MQ=255)

                                         cccGT‑TTTTTC‑T‑TGCCGCATAAAATGCTAAATT‑T‑GTCCCATCCCATTT‑GGCT‑AGGTTTAATTG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTg                                                       <  1:12306/99‑1 (MQ=255)

                                         cccGT‑TTTTTC‑T‑TGAGGCCACAAATTGAAAAAT‑T‑GTACCATTGC‑ATT‑TGTTTGGGTTAAATTT‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTg                                                       <  1:5504276/99‑1 (MQ=255)

                                         cccGT‑TTTTTC‑A‑TGACGGCTAAAATTGCCAATT‑T‑GGACCTTACCAATG‑GACTC‑GGTTCAA‑AGTT‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTg                                                       <  1:4966806/99‑1 (MQ=255)

                                          tcctttttttC‑T‑GGACGGCAAAATTTAAAAATT‑T‑GGCCCAAACAAATT‑GCATCAGGTACAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGccg                                                       <  1:867086/95‑3 (MQ=255)

                                          ctgC‑TTTTTC‑T‑GGCCGACAAAAATTGTAAAAT‑G‑GTGCCATCCCATTG‑GGCAAGGTTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgg                                                      <  1:5651938/98‑1 (MQ=255)

                                          cgttttttttC‑T‑GGGCGGCTCAAATTGTAAATT‑T‑GGCCCAACCCAATG‑GCATCAGTTTCAT‑TT‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTg                                                       <  1:2502481/95‑1 (MQ=255)

                                          ccctttttttC‑T‑TGCCGGCTAAATTTGTAAAAT‑T‑GTGCCATACCAATT‑GGCTAGGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTg                                                       <  1:717089/95‑1 (MQ=255)

                                          ccGT‑TTTTTC‑T‑TGCCGGCTAAAATTGAAAATT‑T‑GCGCCATCCAAATT‑GGCTCGGGTTAAA‑TG‑A‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTgg                                                      <  1:1042311/100‑1 (MQ=255)

                                           cctttttttC‑T‑TGGCGACTAAATTTGTCAATT‑T‑GTCCAATACCATTT‑GGCAAGGGTTCAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgg                                                      <  1:400072/96‑1 (MQ=255)

                                           cctttttttC‑T‑GGGCGCCTCAAATTGACAAAT‑T‑GGCCCACCCAATTT‑GGCTCAGGTAAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgg                                                      <  1:2837885/96‑1 (MQ=255)

                                           cctttttttC‑T‑GGCCGGCTAAAATTGTAAATT‑T‑GCCCAATACCATTG‑GGCTCGGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgg                                                      <  1:4035874/96‑1 (MQ=255)

                                            ttttttttt‑T‑GGACGCCAAAATTTGTAAATT‑T‑GGCCCAAACAAATG‑GGCTAGGTTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgga                                                     <  1:1982785/97‑2 (MQ=255)

                                            ttttttttC‑C‑TGACGGCAAAAATTGTAAAAT‑T‑GTGCCATACCATTG‑GGCTAGGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGt                                                     <  1:758582/97‑1 (MQ=255)

                                            ccttttttC‑T‑TGCCGCCTAAAATTATAAAAT‑T‑GCCCCATCCCAATG‑GCCTCGGTTTAAA‑TT‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgga                                                     <  1:471489/97‑2 (MQ=255)

                                            ccttttttA‑T‑TGACGGCTAAAATTGTAAAAT‑T‑GCGCCAAACC‑ATT‑GGTCTAAGTTCAA‑AGTT‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGt                                                     <  1:3616616/97‑1 (MQ=255)

                                             tttttttC‑T‑GGCCGGCTAAATTTGTAAATT‑T‑GTCCCATCCCAATT‑GGCTCGGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgctt                                                    <  1:2843448/98‑4 (MQ=255)

                                             tttttttC‑T‑GGCCGCCTAAATTTGAAAATT‑T‑GGCCCATCCAATTT‑GGCTCGGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTgggc                                                    <  1:4091707/98‑3 (MQ=255)

                                              ttttttC‑T‑TGGGGGCAAAATTTGACAAAT‑G‑GTGCCATCAGAGGT‑GGCGAGGGTAAAA‑GG‑T‑AGCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGc                                                   <  1:1056791/99‑1 (MQ=255)

                                              ttttttC‑T‑TGACGGCAAAATTTGCAAAAT‑T‑GTGCCATACTAATG‑GGCTAAGGTTAAA‑TA‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGc                                                   <  1:1003041/99‑1 (MQ=255)

                                              ttttttC‑T‑GGACGGCTAAATTTGTAAAAT‑T‑GTCCCATACCATTG‑GGCTAAGTTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGc                                                   <  1:1563181/99‑1 (MQ=255)

                                               tttttt‑t‑tGCCGGTTTAAATTGTAAATT‑T‑GTGCAATACAAATT‑GGATAAGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCt                                                  <  1:5759185/100‑1 (MQ=255)

                                               tttttC‑T‑TGCCGCCACAAATTGTAAATT‑T‑GTCCCATCCCATTG‑GGCTAAGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCt                                                  <  1:1415425/100‑1 (MQ=255)

                                               tttttC‑T‑TGACGACT‑AAATTGATAAATGT‑GCGCCAAACAATTG‑GGTTCGGTTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCt                                                  <  1:1399138/100‑1 (MQ=255)

                                               tttttC‑T‑GGGCGCCTAAAATTG‑CAAAT‑TGGTCCCATACCATTT‑GACTCGGGTAAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCt                                                  <  1:2611614/100‑1 (MQ=255)

                                               tttttC‑T‑GGCCGGCAAAATTTGTAAATT‑T‑GTCCCAT‑CCAATTGGGCTC‑GGTTAAATTG‑T‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCt                                                  <  1:4944796/100‑1 (MQ=255)

                                               tttttC‑T‑GGCCGCCTAAAATTTTAAATT‑T‑TTCCCATACAAATG‑GGCTCAGTTAAAA‑TT‑T‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCt                                                  <  1:4353414/100‑1 (MQ=255)

                                               tttttC‑C‑GGCCGGCTCAATTTGTCAATT‑T‑TTCCCTTCCCATTT‑GCCTGAGGTTAAA‑TT‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCt                                                  <  1:2655977/100‑1 (MQ=255)

                                                 tttC‑T‑TGCCGCCTAAAATTGAAAATT‑T‑GTGCAAAACAAATG‑GGCTAGGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCttg                                                <  1:1677072/100‑1 (MQ=255)

                                                  ttC‑T‑GGACGCCTAAAATTGTAAATT‑T‑TTCCCACACAAATG‑GGAAAAGTTAAAA‑TG‑A‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCttgg                                               <  1:5375010/100‑2 (MQ=255)

                                                   tC‑T‑TGACGGCAAAAATTGAAAATT‑T‑GTGCCAAACCATTG‑GGCTAGGGTAAAA‑TG‑T‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCttgct                                              <  1:2481679/100‑3 (MQ=255)

                                                                     tgcgaatt‑t‑gtGCCTTCCCAATT‑GCCTAGGTTTAAA‑TT‑T‑AGCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGtt                              <  1:3180465/93‑1 (MQ=255)

                                                                     tgaaaaat‑t‑gtGCCAAACAAATG‑GGCTAGGGTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGtt                              <  1:929085/96‑1 (MQ=255)

                                                                     tataaaat‑t‑gtCCTAAACAATTT‑GGCTACCGTTCAA‑TT‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGtt                              <  1:4502895/96‑1 (MQ=255)

                                                                      gcaaatt‑t‑gtGCCATCCAAATG‑GGCTCGGGTTAAA‑GG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGttg                             <  1:663098/94‑2 (MQ=255)

                                                                         aatt‑t‑gtCCCATCCAAATG‑GCCTCAGTTTAAA‑TG‑T‑AGCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCt                          <  1:2579416/97‑1 (MQ=255)

                                                                          att‑t‑gtGCCATACCATTG‑GGTTCAGTTTAAA‑GT‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTa                         <  1:12518/98‑1 (MQ=255)

                                                                          att‑t‑gtCCCATCCCAATG‑GGCTAAGTTCAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTa                         <  1:3745807/98‑1 (MQ=255)

                                                                          att‑t‑gtCCCATCCAAATG‑GGCTAGGGTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTa                         <  1:982620/98‑1 (MQ=255)

                                                                          aat‑t‑gtGCCATACAAATT‑GGCTCGGGTTAAA‑TA‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTa                         <  1:2728226/100‑1 (MQ=255)

                                                                          aat‑t‑gtCCCATACAATTG‑GGCTAGGTTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTa                         <  1:3336819/100‑1 (MQ=255)

                                                                          aat‑t‑ggGCCAT‑CCAATTGGGCGGAGGTTCAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTa                         <  1:1089869/100‑1 (MQ=255)

                                                                                       cacctttgggCTCAGGTAAAT‑TG‑G‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAgg               <  1:3510015/92‑1 (MQ=255)

                                                                                         cAATT‑GGCTGGGGTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:4585419/100‑1 (MQ=255)

                                                                                         cAATT‑GGCTCAGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:2096474/100‑1 (MQ=255)

                                                                                         cAATG‑GGCTGGGGTTAAG‑GG‑T‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:5406881/100‑1 (MQ=255)

                                                                                         cAATG‑GGCTCGGGTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:2163805/100‑1 (MQ=255)

                                                                                         aattt‑GGCTCAGTTTCAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:4228189/97‑1 (MQ=255)

                                                                                         aagtt‑GGCTAAGGTTAAT‑TA‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:5023233/97‑1 (MQ=255)

                                                                                         aaaTT‑GGCTCAGGTTCAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:812042/99‑1 (MQ=255)

                                                                                          attt‑GGCTCAGTTACAA‑TC‑T‑ATCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTa           <  1:1545369/98‑1 (MQ=255)

                                                                                          aattgggCTCGGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACt            <  1:1621729/95‑1 (MQ=255)

                                                                                          aaTT‑GGCTCATTTTAAA‑TG‑T‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTa           <  1:1385342/100‑1 (MQ=255)

                                                                                          aaTG‑GGCTCGGGTTAAA‑TG‑T‑AGCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTa           <  1:5252599/100‑1 (MQ=255)

                                                                                           attgggCTCAGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTa           <  1:3431473/96‑1 (MQ=255)

                                                                                            ttgggCTGAGGTTAAA‑GG‑A‑ACCCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTat          <  1:4790083/97‑2 (MQ=255)

                                                                                            tt‑GGCTCAGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAAc         <  1:119208/100‑1 (MQ=255)

                                                                                            atgcgttCAGGTCAAA‑TG‑T‑CACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTag          <  1:2452237/94‑2 (MQ=255)

                                                                                             tgggCTCAGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAAc         <  1:3330900/98‑1 (MQ=255)

                                                                                             tgggCTAAGGTAAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAAc         <  1:2997230/98‑1 (MQ=255)

                                                                                             t‑GGCTGAGGTTAAA‑TG‑A‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACa        <  1:2121551/100‑1 (MQ=255)

                                                                                              tggcttcagTTCAACTG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAAc         <  1:2249310/92‑1 (MQ=255)

                                                                                                gggtaGGTTAAA‑AG‑TAAACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACag       <  1:4184212/96‑2 (MQ=255)

                                                                                                 ctgcggTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTg     <  1:237814/96‑1 (MQ=255)

                                                                                                 cTCAGTTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACAttc     <  1:58597/100‑2 (MQ=255)

                                                                                                  taagttacAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGa    <  1:2445619/93‑1 (MQ=255)

                                                                                                  taaGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGa    <  1:5549191/98‑1 (MQ=255)

                                                                                                   aaGGTTAAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGaa   <  1:1113572/99‑1 (MQ=255)

ATGTATCTTTATCTCTCATTAAATGTTTTAAAAATGCTCGCTCCGC‑TTTTTC‑T‑TGACGGCTCAAATTGTCAAAT‑T‑GTGCCATACCAATT‑GGCTCAGGTTCAA‑TG‑T‑AACCGCCATACTCATCTTCTGGATAATAATTGGCTGGTGCTTGATTGAATTGTATTTCGTTAGCTAATTGCTCAGGACTAACATTGAAA  >  NC_007793/1672985‑1673178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`