| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 47,188 | C→T | L111L (TTG→TTA) | SAUSA300_RS00200 ← | recombinase RecB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 47,188 | 0 | C | T | 100.0% | 39.7 / NA | 15 | L111L (TTG→TTA) | SAUSA300_RS00200 | recombinase RecB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/3); total (12/3) | |||||||||||
CGTTCTCGACAATGTTATTACGTTCGAATTCTGAGAAACTCGCAAGTATCTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGACAAACTGAAAAATTCGACATTTTGTTTGTGTAAATCTTCGACAATTTTGAGAAGATCAGATGTATTACGAGCTAATCGGTTTGTTTTGT > NC_007793/47091‑47276 | cattCTCGACAATGTTATTACGTTCGAATTCTGAGAAACTCGCAAGTATTTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATaa < 1:4825060/98‑1 (MQ=255) cGACAATGTTACTACGTTCGAATTCTGAGAAACTCGCAAGTATTTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGaa > 1:579199/1‑100 (MQ=255) ccaaCTCGCAAGTATTTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCt > 1:2102646/3‑100 (MQ=255) cGCAAGTATTTGTAACATGAGTTTACCAGAAGAGGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGAcg > 1:5134558/1‑99 (MQ=255) cGCAAGTATTTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGAcg > 1:1409144/1‑99 (MQ=255) cGCAAGTATTTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGAcg > 1:3943455/1‑99 (MQ=255) cGCAAGTATTTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGAcg > 1:4291413/1‑99 (MQ=255) tGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCagaa > 1:2899233/1‑100 (MQ=255) gTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCagaag > 1:5477560/1‑100 (MQ=255) ctACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCAGAAGATCCGATGTAt > 1:1868566/2‑100 (MQ=255) tACCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCAGAAGATCCGATGTAtt > 1:2141676/1‑100 (MQ=255) aCCAGAAGAAGTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCAGAAGATCCGATGTATTa > 1:5598481/1‑100 (MQ=255) aagTATTGACTTCCATACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCAGAAGATCCGATGTATTACGAGCTaa < 1:4713002/100‑1 (MQ=255) gtACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCAGAAGATCCGATGTATTACGAGCTAATCGGtttgttttgt > 1:3864434/2‑100 (MQ=255) aTACGCTCTGATAAACTGAAAAATTCGACATTTTGTTTATGCAAATCTTCGACGATTTTCAGAAGATCCGATGTATTACGAGCTAATCGGtttgtattgt < 1:2524642/100‑1 (MQ=255) | CGTTCTCGACAATGTTATTACGTTCGAATTCTGAGAAACTCGCAAGTATCTGTAACATGAGTTTACCAGAAGAAGTATTGACTTCCATACGCTCTGACAAACTGAAAAATTCGACATTTTGTTTGTGTAAATCTTCGACAATTTTGAGAAGATCAGATGTATTACGAGCTAATCGGTTTGTTTTGT > NC_007793/47091‑47276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |