Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,633,978	A→G	L50S (TTA→TCA)	SAUSA300_RS08080 ←	mannosyl‑glycoprotein endo‑beta‑N‑acetylglucosamidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,633,978	0	A	G	100.0%	11.2 / NA	6	L50S (TTA→TCA)	SAUSA300_RS08080	mannosyl‑glycoprotein endo‑beta‑N‑acetylglucosamidase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (3/3);  total (3/3)

CCACCTTTAGCATTTTCGTTAAACTTATCAATACCATTTGCCGAAACATTACCGCCACTAACAGTACAACCAGCATCATCTTTACCTTTATTTAAATCAGGCGCTAACAAAAACATTATAATTACTGGAAATATAAAAAAAGCCACCACACATAAAATG  >  NC_007793/1633885‑1634043                                                                                              |                                                                  ccACCTTTAGCATTTTCATTAAACTTATCAATACCATTTGCCGAAACATTACCGCCACTAACAGTACAACCAGCATCATCTTTATCTTTATTAGAATCAg                                                             >  1:5106618/1‑100 (MQ=255)          gctttttCATTAAACTTATCAATCCCTTTTGCCAAACCATTACCGCCACTAACAGTACAACCAGCATCATCTTTATCTTTATTTGAATCAGGCGCTAACa                                                    <  1:1649338/97‑1 (MQ=255)          gCATTTTGATAAAACTTAAAAATCCCATTGGCAAAAACTTTACCGCCACTAACAGTACAACCAGCATCATCTTTATCTTTATTTGAATCAGGCGCTAACa                                                    <  1:1281451/100‑1 (MQ=255)                   taaaaCTTAAAAATACCATTTGCAAAAAATTTACCGCCACTAACAGTACAACCAGCATCATCTTTATCTTTATTTGAATCAGGCGCTAACAAAAACATta                                           <  1:1322591/98‑1 (MQ=255)                                                  tACCGCCACTAACAGTACAACCAGCATCATCTTTATCTTTATTTGAATCAGGCGCTAACAAAAACATTACAATTACTGGAAATGTAAAAAAAGCcaccac            >  1:5408127/1‑100 (MQ=255)                                                            aaCAGTACAACCAGCATCATCTTTATCTTTATTTGAATCAGGCGCTAACAAAAACATTACAATTACTGGAAATGTAAAAAAAGCCACCACACACAAAatg  >  1:1257724/1‑100 (MQ=255)                                                                                              |                                                                  CCACCTTTAGCATTTTCGTTAAACTTATCAATACCATTTGCCGAAACATTACCGCCACTAACAGTACAACCAGCATCATCTTTACCTTTATTTAAATCAGGCGCTAACAAAAACATTATAATTACTGGAAATATAAAAAAAGCCACCACACATAAAATG  >  NC_007793/1633885‑1634043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑