Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,631,164	A→G	S44S (TCT→TCC)	SAUSA300_RS08060 ←	integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,631,164	0	A	G	100.0%	248.1 / NA	91	S44S (TCT→TCC)	SAUSA300_RS08060	integrase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (1/90);  total (1/90)

GTTTAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTGCATTTTCAATAGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTCTTCAAATAGAGCAAACTCCTTACCTCTA  >  NC_007793/1631070‑1631260                                                                                               |                                                                                                 gTTTAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAAcc                                                                                             <  1:586087/100‑1 (MQ=255)  tttAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCa                                                                                            <  1:5701408/100‑1 (MQ=255)  tttAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCa                                                                                            <  1:1140632/100‑1 (MQ=255)   ttAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCaa                                                                                           <  1:3458214/100‑2 (MQ=255)   ttAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCAc                                                                                           <  1:2479/100‑1 (MQ=255)   ttAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCAc                                                                                           <  1:2862528/100‑1 (MQ=255)      aCAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGtt                                                                                        <  1:448213/100‑1 (MQ=255)      aCAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGtt                                                                                        <  1:1926765/100‑1 (MQ=255)      aCAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGtt                                                                                        <  1:1159019/100‑1 (MQ=255)       cAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTg                                                                                       <  1:1529065/100‑1 (MQ=255)       cAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTg                                                                                       <  1:1858131/100‑1 (MQ=255)       cAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCCTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTg                                                                                       <  1:4516019/100‑1 (MQ=255)       cAGCTTCATCTAATGAATTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTg                                                                                       <  1:1586174/100‑1 (MQ=255)         gCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGat                                                                                     <  1:5071034/100‑1 (MQ=255)         gCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGat                                                                                     <  1:4283190/100‑1 (MQ=255)         gCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGag                                                                                     <  1:3411423/100‑2 (MQ=255)           ttCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGatat                                                                                   <  1:1355040/100‑1 (MQ=255)             cATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATgg                                                                                 <  1:5562118/100‑1 (MQ=255)             cATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATgg                                                                                 <  1:5490358/100‑1 (MQ=255)             cATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATgg                                                                                 <  1:3404845/100‑1 (MQ=255)               tCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATgggc                                                                               <  1:1835946/100‑3 (MQ=255)                cTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACa                                                                              <  1:110868/100‑1 (MQ=255)                    tGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACATTGATATGGACAActc                                                                          <  1:5777445/100‑3 (MQ=255)                      aCTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCaa                                                                        <  1:3023114/100‑1 (MQ=255)                       cTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCaat                                                                       <  1:2954618/100‑2 (MQ=255)                           tgtgTTATATTTGCAAAATCCGTACCTTTAGGAAAATACTGTC‑TAAAAGGCCATTTACAGTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACt                                                                  <  1:1872366/100‑1 (MQ=255)                            gtgtTATATTTGCAAAATCCGTACCTGTATGATAATACTTTTTTAAAAGTCCATTTACATTTTCAATGGATCCCCCTTCATATGGACACCCCAACTccca                                                                  <  1:2630772/100‑4 (MQ=255)                             tgtTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAAAGGAACCGCGTTGATATGGACAACCCAAATCACTa                                                                 <  1:944704/100‑1 (MQ=255)                              tttATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTaa                                                                >  1:4548746/2‑100 (MQ=255)                               ttATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTaaa                                                               <  1:2321152/100‑1 (MQ=255)                                     ttGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAaaataaat                                                         <  1:2391073/100‑1 (MQ=255)                                        cAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAAtact                                                      <  1:3226042/100‑1 (MQ=255)                                           gaTCTGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTAca                                                   <  1:3095588/99‑1 (MQ=255)                                           aaTCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTAca                                                   <  1:2836796/100‑1 (MQ=255)                                              ccGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTAcaagc                                                <  1:3035856/100‑3 (MQ=255)                                                gTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTAcaattca                                              <  1:3705724/100‑1 (MQ=255)                                                          gATAATACTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAGTACTACAATTCAATTCAtcttg                                    <  1:434843/100‑2 (MQ=255)                                                             aataCTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTAt                                 <  1:3039/100‑1 (MQ=255)                                                             aataCTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTAt                                 <  1:2839341/100‑1 (MQ=255)                                                                 cTGTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTAtttgt                             <  1:1600839/100‑3 (MQ=255)                                                                   ttCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATttgttc                           <  1:1498882/99‑1 (MQ=255)                                                                   gTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATttgttc                           <  1:2982906/100‑1 (MQ=255)                                                                   gTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATttgttc                           <  1:461879/100‑1 (MQ=255)                                                                   gTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATttgttc                           <  1:4825157/100‑1 (MQ=255)                                                                   gTCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATttgttc                           <  1:39865/100‑1 (MQ=255)                                                                    tCTTAAAAGTCCATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATttgttct                          <  1:418723/100‑2 (MQ=255)                                                                    tCTTAAAAGTCCATTTACATTTACAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCa                          <  1:3705010/100‑1 (MQ=255)                                                                               cATTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGcgat               <  1:4478562/100‑4 (MQ=255)                                                                                aTTTACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGcgagc              <  1:391602/100‑5 (MQ=255)                                                                                 tttACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACt             <  1:2214993/100‑1 (MQ=255)                                                                                 tttACATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACt             <  1:4566601/100‑1 (MQ=255)                                                                                     cATTTTCAATGGAACCGCGTTGATATGGACAACCCAAAACACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCtt         <  1:4380720/100‑1 (MQ=255)                                                                                     cATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCtt         <  1:4817515/100‑1 (MQ=255)                                                                                     cATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCtt         <  1:3871172/100‑1 (MQ=255)                                                                                     cATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCtt         <  1:1697105/100‑1 (MQ=255)                                                                                     cATTTTCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCtt         <  1:337364/100‑1 (MQ=255)                                                                                      aTTTTCAATGGAACCACGTTGATATGGACAGCCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCttg        <  1:2395359/100‑2 (MQ=255)                                                                                       ttttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTat       <  1:3489244/100‑2 (MQ=255)                                                                                        tttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAcc      <  1:2482698/100‑1 (MQ=255)                                                                                        tttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAca      <  1:812636/100‑2 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct     <  1:5738905/100‑1 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct     <  1:5607313/100‑1 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct     <  1:5538408/100‑1 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct     <  1:1502361/100‑1 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct     <  1:832646/100‑1 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct     <  1:840389/100‑1 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTAAAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACct     <  1:4645104/100‑1 (MQ=255)                                                                                         ttCAATGGAACCACGTTGATATGGACAACCCAAATCACT‑AAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctc    <  1:3440316/100‑1 (MQ=255)                                                                                          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccgc    <  1:1842971/100‑3 (MQ=255)                                                                                          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccgc    <  1:4464720/100‑3 (MQ=255)                                                                                          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccag    <  1:3403071/100‑3 (MQ=255)                                                                                          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctc    <  1:4249644/100‑1 (MQ=255)                                                                                          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACcta    <  1:4361684/100‑2 (MQ=255)                                                                                          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACcta    <  1:5736951/100‑2 (MQ=255)                                                                                          tCAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACCCCTTACctc    <  1:5612583/100‑1 (MQ=255)                                                                                           cAATGGAACCACGTTGATGTGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct   <  1:5777382/100‑1 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAACTAAATACTACAATACAATTCCTCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct   <  1:2729182/100‑1 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccagc   <  1:3019974/100‑4 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccagc   <  1:655936/100‑4 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccaca   <  1:1026796/100‑4 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct   <  1:2465006/100‑1 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct   <  1:5465454/100‑1 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctct   <  1:4147356/100‑1 (MQ=255)                                                                                           cAATGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctcg   <  1:3870704/100‑2 (MQ=255)                                                                                            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTAccagat  <  1:789953/100‑5 (MQ=255)                                                                                            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctggg  <  1:1375585/100‑4 (MQ=255)                                                                                            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctctg  <  1:3712315/100‑2 (MQ=255)                                                                                            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACctcga  <  1:1940958/100‑3 (MQ=255)                                                                                            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTa  <  1:1139432/100‑1 (MQ=255)                                                                                            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTa  <  1:4224919/100‑1 (MQ=255)                                                                                            aaTGGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTGTTCAAATAGAGCGAACTCCTTACCTCTa  <  1:2515427/100‑1 (MQ=255)                                                                                               |                                                                                                 GTTTAACAGCTTCATCTAATGACTTTTGTGTTATATTTGCAAAATCCGTACCTTTAGGATAATACTGTCTTAAAAGTCCATTTGCATTTTCAATAGAACCACGTTGATATGGACAACCCAAATCACTAAAATAAATACTACAATTCAATTCATCTTCTATTTCTTCAAATAGAGCAAACTCCTTACCTCTA  >  NC_007793/1631070‑1631260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑