D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,624,502	T→C	K35K (AAA→AAG)	SAUSA300_RS08015 ←	DNA repair protein RecN

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,624,502	0	T	C	100.0%	771.7 / NA	268	K35K (AAA→AAG)	SAUSA300_RS08015	DNA repair protein RecN
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (1/267); total (1/267)

Only 100 of 269 total aligned reads displayed.

ATATACCTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGATTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCAGAAAATTGAATTTCTAATTCTTCAATAATAGCAAATTGCTTGATTGATAAGG  >  NC_007793/1624405‑1624596

     ttccgatctaCAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:5456613/91‑1 (MQ=255)

     ccgccGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:962499/96‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:361659/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:561586/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:5003794/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:4799028/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:4367627/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:4320480/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:4059391/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:3805650/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:3664822/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:3304818/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:2907662/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:289468/100‑1 (MQ=255)

     ccTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:1686415/100‑1 (MQ=255)

     ccTACGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTg                                                                                         <  1:1780962/100‑1 (MQ=255)

      cTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGa                                                                                        <  1:1031155/100‑1 (MQ=255)

      cTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGa                                                                                        <  1:3956819/100‑1 (MQ=255)

      cTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGa                                                                                        <  1:326635/100‑1 (MQ=255)

       ttCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGaa                                                                                       <  1:51496/100‑1 (MQ=255)

        tCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGaat                                                                                      <  1:4554296/100‑2 (MQ=255)

         cGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAAcc                                                                                     <  1:4146514/100‑1 (MQ=255)

          gATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAAccc                                                                                    <  1:4128014/100‑1 (MQ=255)

          gATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAAccc                                                                                    <  1:1013225/100‑1 (MQ=255)

           cgatctgCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCg                                                                                   <  1:679516/94‑1 (MQ=255)

           aTGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCg                                                                                   <  1:4638816/100‑1 (MQ=255)

           aTGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCg                                                                                   <  1:5664646/100‑1 (MQ=255)

           aTGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCg                                                                                   <  1:2932679/100‑1 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAAcccct                                                                                  <  1:5603420/100‑3 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCgg                                                                                  <  1:1598719/100‑2 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCga                                                                                  <  1:3135613/100‑2 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGt                                                                                  <  1:13440/100‑1 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGt                                                                                  <  1:3153619/100‑1 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGt                                                                                  <  1:3092885/100‑1 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGt                                                                                  <  1:2833450/100‑1 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGt                                                                                  <  1:163646/100‑1 (MQ=255)

            tGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGt                                                                                  <  1:4415479/100‑1 (MQ=255)

            atctgcctcttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCga                                                                                  <  1:3340175/91‑2 (MQ=255)

            atctaGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGt                                                                                  <  1:3234566/96‑1 (MQ=255)

             gACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCgca                                                                                 <  1:3366813/100‑3 (MQ=255)

             gACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGtt                                                                                 <  1:1730455/100‑1 (MQ=255)

             gACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGtt                                                                                 <  1:239900/100‑1 (MQ=255)

             gACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGtg                                                                                 <  1:3008358/100‑2 (MQ=255)

              aCAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCgcac                                                                                <  1:5215827/100‑4 (MQ=255)

              aCAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGttt                                                                                <  1:3671590/100‑1 (MQ=255)

              aCAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGttg                                                                                <  1:5415118/100‑2 (MQ=255)

              aCAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGtgg                                                                                <  1:3459367/100‑3 (MQ=255)

               cAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGttag                                                                               <  1:419752/100‑3 (MQ=255)

                aGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATACCAATTAATTATCCAATTGCATCTATAATAATTGACTTACCTGAACCCGtgcac                                                                              <  1:1621557/100‑5 (MQ=255)

                  gccttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:854226/97‑1 (MQ=255)

                  ccTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTTTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:459092/100‑1 (MQ=255)

                  ccTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:4903824/100‑1 (MQ=255)

                  ccTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:3978157/100‑1 (MQ=255)

                  ccTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:1526569/100‑1 (MQ=255)

                  ccTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:4492887/100‑1 (MQ=255)

                  ccTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:2587495/100‑1 (MQ=255)

                  ccTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacc                                                                            <  1:484549/100‑1 (MQ=255)

                   cTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAGTTGACTTACCTGAACCCGTTTcacca                                                                           <  1:525895/100‑1 (MQ=255)

                   cTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacca                                                                           <  1:90833/100‑1 (MQ=255)

                   cTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcacca                                                                           <  1:2856676/100‑1 (MQ=255)

                    tttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTcaccat                                                                          <  1:5074123/100‑2 (MQ=255)

                     ttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACt                                                                         <  1:601000/100‑1 (MQ=255)

                     ttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACt                                                                         <  1:1845078/100‑1 (MQ=255)

                     ttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACt                                                                         <  1:1977828/100‑1 (MQ=255)

                     ttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACt                                                                         <  1:2240770/100‑1 (MQ=255)

                     ttttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACt                                                                         <  1:2543094/100‑1 (MQ=255)

                      tttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACtt                                                                        <  1:3786092/100‑1 (MQ=255)

                      tttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACtt                                                                        <  1:3527424/100‑1 (MQ=255)

                      tttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACtt                                                                        <  1:5312694/100‑1 (MQ=255)

                      tttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACtg                                                                        <  1:3751675/100‑2 (MQ=255)

                       ttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAGCCCGTTTCACCACTTa                                                                       <  1:585584/100‑1 (MQ=255)

                       ttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTa                                                                       <  1:1386466/100‑1 (MQ=255)

                       ttttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTa                                                                       <  1:2116241/100‑1 (MQ=255)

                        tttCACCATGTCTTACAAAGTCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTaa                                                                      <  1:553624/100‑1 (MQ=255)

                         ttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACtcaca                                                                     <  1:2075515/100‑5 (MQ=255)

                         ttCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTaaa                                                                     <  1:2019004/100‑1 (MQ=255)

                              cATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAgg                                                                <  1:3219173/100‑2 (MQ=255)

                               aTGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGtt                                                               <  1:1751684/100‑1 (MQ=255)

                               aTGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGtt                                                               <  1:349637/100‑1 (MQ=255)

                                tGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGttc                                                              <  1:4476882/100‑2 (MQ=255)

                                tGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTa                                                              <  1:709106/100‑1 (MQ=255)

                                tGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTa                                                              <  1:2105810/100‑1 (MQ=255)

                                tGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTa                                                              <  1:661363/100‑1 (MQ=255)

                                tGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTa                                                              <  1:2438495/100‑1 (MQ=255)

                                    ttACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAAcc                                                          <  1:821026/100‑1 (MQ=255)

                                    ttACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAAcc                                                          <  1:4293011/100‑1 (MQ=255)

                                     tACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCa                                                         >  1:4716224/1‑100 (MQ=255)

                                       cAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATc                                                       <  1:21630/100‑1 (MQ=255)

                                       cAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATc                                                       <  1:3716599/100‑1 (MQ=255)

                                       cAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCCATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATc                                                       <  1:248171/100‑1 (MQ=255)

                                       cAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGAATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATc                                                       <  1:1210300/100‑1 (MQ=255)

                                        aaaaTCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCa                                                      <  1:743141/100‑1 (MQ=255)

                                        aaaaTCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCa                                                      <  1:3878663/100‑1 (MQ=255)

                                         aaaTCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCAg                                                     <  1:2356735/100‑1 (MQ=255)

                                                cttccgatctcATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCAGAAAATTg                                              <  1:5389897/93‑1 (MQ=255)

                                                        ctcATTCCAATTAATTGTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCAGAAAATTGAATTTCTa                                      <  1:2737801/100‑1 (MQ=255)

                                                                        gTCCAGTTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACGGTTAAACCATCAGAAAATTGAATTTCTAATTCTTCAATAATAGc                      <  1:2460046/100‑1 (MQ=255)

                                                                        gTCCAATTGCATCTATAATAATTGACTTACCTGAACCCGGTTCACCACTTAAAACAGTTAAACCATCAGAAAATTGAATTTCTAATTCTTCAATAATAGc                      <  1:2299480/100‑1 (MQ=255)

                                                                          ccAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCAGAAAATTGAATTTCTAATTCTTCAATAATAGCag                    <  1:1254078/100‑2 (MQ=255)

                                                                           cAATTGCATCTATAATAATTGACTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCAGAAAATTGAATTTCTAATTCTTCAATAATAGCaag                   <  1:1182405/100‑2 (MQ=255)

ATATACCTTCGATGACAGCCTTTTTTTCACCATGTCTTACAAAATCAGATGAAGCTCTCATTCCAATTAATTGTCCAATTGCATCTATAATAATTGATTTACCTGAACCCGTTTCACCACTTAAAACAGTTAAACCATCAGAAAATTGAATTTCTAATTCTTCAATAATAGCAAATTGCTTGATTGATAAGG  >  NC_007793/1624405‑1624596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`