D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,598,172	A→G	S110S (TCT→TCC)	SAUSA300_RS07880 ←	pseudouridine synthase B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,598,172	0	A	G	99.7%	812.5 / NA	300	S110S (TCT→TCC)	SAUSA300_RS07880	pseudouridine synthase B
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (3/296); minor base T (0/1); total (3/297)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 300 total aligned reads displayed.

ACCTTTTAATTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCAGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTATCATCAGATACA  >  NC_007793/1598076‑1598268

   ttttAATTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTa                                                                                            <  1:4309983/100‑1 (MQ=255)

       aaTTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCAt                                                                                        <  1:3836014/100‑1 (MQ=255)

       aaTTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCAt                                                                                        <  1:4458989/100‑1 (MQ=255)

       aaTTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCAt                                                                                        <  1:255904/100‑1 (MQ=255)

       aaTTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCAt                                                                                        <  1:1407569/100‑1 (MQ=255)

       aaTTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAAGTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCAt                                                                                        <  1:5549585/100‑1 (MQ=255)

       aaTTTCGCAACATATTTTTTCTTAATTGGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCAt                                                                                        <  1:2036411/100‑1 (MQ=255)

            cGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCt                                                                                   <  1:2259477/100‑1 (MQ=255)

            cGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCt                                                                                   <  1:5720556/100‑1 (MQ=255)

            cGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGACATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCt                                                                                   <  1:3917191/100‑1 (MQ=255)

                 cATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACg                                                                              <  1:316019/100‑1 (MQ=255)

                     ttttttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCa                                                                          <  1:5687871/100‑1 (MQ=255)

                     ttttttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCa                                                                          <  1:795164/100‑1 (MQ=255)

                     ttttttCTTAATTTAATATCTTGGATGTGTCATTAAATTAGTAAATTCACCGTCATTTGTGAGTAATAACACTCCGGAAGTATCATAGTCTAAACGACCa                                                                          <  1:1620115/100‑1 (MQ=255)

                      tttttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCag                                                                         <  1:4153339/100‑2 (MQ=255)

                       ttttCTTAATTTGATATCTTGTATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAAc                                                                        <  1:5521340/100‑1 (MQ=255)

                       ttttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAAc                                                                        <  1:1821728/100‑1 (MQ=255)

                       ttttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAAc                                                                        <  1:5606691/100‑1 (MQ=255)

                       ttttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAAc                                                                        <  1:1059713/100‑1 (MQ=255)

                        tttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACa                                                                       <  1:3398935/100‑1 (MQ=255)

                        tttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACa                                                                       <  1:1260609/100‑1 (MQ=255)

                        tttCTTAAATTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACa                                                                       <  1:3225612/100‑1 (MQ=255)

                         ttCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAg                                                                      <  1:1439938/100‑1 (MQ=255)

                          tCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAgg                                                                     <  1:5225293/100‑1 (MQ=255)

                          tCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAgg                                                                     <  1:4238520/100‑1 (MQ=255)

                           cTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGa                                                                    <  1:5326140/100‑1 (MQ=255)

                           cTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGa                                                                    <  1:1751639/100‑1 (MQ=255)

                            ttAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAgggc                                                                   <  1:732348/100‑3 (MQ=255)

                            ttAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAggca                                                                   <  1:3511935/100‑3 (MQ=255)

                            ttAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGAt                                                                   <  1:2829627/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACacacac                                                                  <  1:1346376/100‑6 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAgggct                                                                  <  1:4786074/100‑4 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGAtg                                                                  <  1:1644627/100‑2 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:2621773/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:2705033/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:4279263/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:5170458/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:3119930/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:5797423/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCAGCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:564871/100‑1 (MQ=255)

                             tAATTTGATATCTTGGATGTGTCACTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATa                                                                  <  1:2316490/100‑1 (MQ=255)

                              aaTTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATat                                                                 <  1:4409521/100‑2 (MQ=255)

                              aaTTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATac                                                                 <  1:5048144/100‑2 (MQ=255)

                               aTTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATaaa                                                                <  1:4756763/100‑1 (MQ=255)

                                tttGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAAt                                                               <  1:667838/100‑1 (MQ=255)

                                      atCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGc                                                         <  1:491581/100‑1 (MQ=255)

                                      atCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGc                                                         <  1:35954/100‑1 (MQ=255)

                                        cTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCtt                                                       <  1:3445951/100‑1 (MQ=255)

                                        cTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCtt                                                       <  1:4983594/100‑1 (MQ=255)

                                        cTTGGATGTGTCATTAAAGTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCtt                                                       <  1:1885174/100‑1 (MQ=255)

                                         ttGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCtta                                                      <  1:114393/100‑2 (MQ=255)

                                          tGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCt                                                     <  1:3971503/100‑1 (MQ=255)

                                             aTGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCtatt                                                  <  1:3772620/100‑2 (MQ=255)

                                                tgtCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATca                                               <  1:2134748/100‑2 (MQ=255)

                                                            aGTAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCt                                   <  1:3482121/100‑1 (MQ=255)

                                                              tAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGt                                 <  1:170567/100‑1 (MQ=255)

                                                              tAAATTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGt                                 <  1:1947605/100‑1 (MQ=255)

                                                                aaTTCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTag                               <  1:1604599/100‑2 (MQ=255)

                                                                  ttCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAAcc                             <  1:91450/100‑1 (MQ=255)

                                                                  ttCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAAcc                             <  1:4191693/100‑1 (MQ=255)

                                                                  ttCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAAcc                             <  1:3252935/100‑1 (MQ=255)

                                                                   tCACCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCa                            <  1:3178297/100‑1 (MQ=255)

                                                                     aCCATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACt                          <  1:1391686/100‑1 (MQ=255)

                                                                      ccATCATTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCAcaa                         <  1:1664336/100‑3 (MQ=255)

                                                                       catcatTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGt                        <  1:1109459/100‑1 (MQ=255)

                                                                       catcatTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGt                        <  1:778069/100‑1 (MQ=255)

                                                                       catcatTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGt                        <  1:2643382/100‑1 (MQ=255)

                                                                       catcatTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGt                        <  1:4836376/100‑1 (MQ=255)

                                                                        atcatTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGtc                       <  1:1514074/100‑2 (MQ=255)

                                                                          catTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACg                     <  1:1208999/100‑1 (MQ=255)

                                                                           atTTGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGt                    <  1:3072391/100‑1 (MQ=255)

                                                                            tttGTGAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGtt                   <  1:4601289/100‑2 (MQ=255)

                                                                              tgtgAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCct                 <  1:2484166/100‑1 (MQ=255)

                                                                               gtgAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCctg                <  1:5759904/100‑2 (MQ=255)

                                                                               gtgAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCcta                <  1:4630467/100‑2 (MQ=255)

                                                                                tgAGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCctct               <  1:1921115/100‑1 (MQ=255)

                                                                                  aGTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCctcgag             <  1:3380464/100‑4 (MQ=255)

                                                                                   gTAATAACAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatc            <  1:1167607/100‑1 (MQ=255)

                                                                                     aataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcat          <  1:862942/100‑1 (MQ=255)

                                                                                     aataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcat          <  1:3830184/100‑1 (MQ=255)

                                                                                     aataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcat          <  1:5365794/100‑1 (MQ=255)

                                                                                     aataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTaacat          <  1:4011156/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACGGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:5443415/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTGAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:2976591/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:2101502/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:4097846/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:3044304/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:447222/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:4523012/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:1480245/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:4717394/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:1542331/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:369560/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:2187011/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:3313123/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:4071301/100‑1 (MQ=255)

                                                                                      ataaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTatcatc         <  1:5098791/100‑1 (MQ=255)

                                                                                       taaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCctccgcgttgg        <  1:4142119/100‑9 (MQ=255)

                                                                                       taaCAATCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTAtcatca        <  1:1038368/100‑1 (MQ=255)

                                                                                             tCCGGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTATCATCAGATacc  <  1:5109448/100‑2 (MQ=255)

ACCTTTTAATTTCGCAACATATTTTTTCTTAATTTGATATCTTGGATGTGTCATTAAATTAGTAAATTCACCATCATTTGTGAGTAATAACAATCCAGAAGTATCATAGTCTAAACGACCAACAGGATAAATACGTGCTTCTATATCTTTAAAGTAATCTGTAACCACTGTACGTCCTCTATCATCAGATACA  >  NC_007793/1598076‑1598268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`