D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	5,010	C→G	P358A (CCT→GCT)	SAUSA300_RS00025 →	DNA recombination protein RecF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	5,010	0	C	G	100.0%	943.7 / NA	344	P358A (CCT→GCT)	SAUSA300_RS00025	DNA recombination protein RecF
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (335/9); total (335/9)

Only 100 of 344 total aligned reads displayed.

GCGTCAAACGCATTTATTAAGTACGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACCCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGATGTAAACAACACGGATAATTATGGTG  >  NC_007793/4913‑5106

gcgTCAAACGCATTTATTAAGTACGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCt                                                                                                >  1:946857/1‑100 (MQ=255)

     tcaCGCATTTATTAAGTACGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAAtt                                                                                           >  1:364807/3‑100 (MQ=255)

      aaCGCATTTATTAAGTACGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTg                                                                                          >  1:689033/1‑100 (MQ=255)

                 taAGTACGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTaa                                                                               >  1:796272/1‑100 (MQ=255)

                  aaGTACGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGCAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAAt                                                                              >  1:5005970/1‑100 (MQ=255)

                      aCGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAg                                                                          >  1:5256199/1‑100 (MQ=255)

                      aCGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAg                                                                          >  1:5717861/1‑100 (MQ=255)

                          ttCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGa                                                                      >  1:3709516/1‑100 (MQ=255)

                          ttCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGa                                                                      >  1:3613906/1‑100 (MQ=255)

                          ttCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGa                                                                      >  1:4071275/1‑100 (MQ=255)

                           tCAGCATAAAGTACAAACGTTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaa                                                                     >  1:4443068/1‑100 (MQ=255)

                           tCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaa                                                                     >  1:1348223/1‑100 (MQ=255)

                           accccATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaa                                                                     >  1:2421514/5‑100 (MQ=255)

                            gtgCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:4946449/3‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTGACCAAgatcgga                                                                    >  1:4751672/1‑94 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:4587111/1‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:4028079/1‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:4883360/1‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:1887769/1‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:3381963/1‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:1555731/1‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:821077/1‑100 (MQ=255)

                            cAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGaaa                                                                    >  1:1260922/1‑100 (MQ=255)

                             aGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAAt                                                                   >  1:16033/1‑100 (MQ=255)

                             aGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAAt                                                                   >  1:1441565/1‑100 (MQ=255)

                             aGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAAt                                                                   >  1:2213830/1‑100 (MQ=255)

                             aGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAAt                                                                   >  1:4625805/1‑100 (MQ=255)

                                          aaCATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAg                                                      <  1:230292/100‑1 (MQ=255)

                                           gtgcttGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGa                                                     >  1:3070871/5‑100 (MQ=255)

                                            cATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGaa                                                    <  1:3454263/100‑1 (MQ=255)

                                               ttGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGc                                                 >  1:1790458/1‑100 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACGGAAAGAGAtcggaa                                         >  1:875219/1‑95 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGcagatcgga                                         >  1:1099331/1‑92 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGaagatcg                                         >  1:2438195/1‑94 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGa                                         >  1:3755246/1‑100 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGa                                         >  1:1402151/1‑100 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGa                                         >  1:985861/1‑100 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGa                                         >  1:2037939/1‑100 (MQ=255)

                                                       aCGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGCGAAATTATAAAGTAACAGAAAGCGATGGTGa                                         >  1:5047003/1‑100 (MQ=255)

                                                         taCATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACt                                       >  1:3323074/2‑100 (MQ=255)

                                                           cATCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGc                                     >  1:2456621/1‑100 (MQ=255)

                                                             tCTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAt                                   >  1:2126997/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAACTTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:2520404/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:4186519/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:319343/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:2615874/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:1987294/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:4281200/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:5413172/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:2175783/1‑100 (MQ=255)

                                                              cTGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:581175/1‑100 (MQ=255)

                                                              cTGTAGATGGCATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:5378649/1‑100 (MQ=255)

                                                              atGTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAtt                                  >  1:3251429/2‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTGAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:3909431/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACGGAAAGCGATGGTGACTGCATTGt                                >  1:1050192/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGGCTGCATTGt                                >  1:2814574/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGTATTGt                                >  1:561026/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCGTTGt                                >  1:2950710/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTgc                                <  1:2547668/100‑2 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:5624590/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:2350645/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:4990090/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:3825955/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:5209481/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:1900712/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:1858136/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:2228178/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:5687846/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:1738267/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:5757232/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:1683462/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:721470/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:1382626/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:1017313/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:4320006/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:3583448/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:3297735/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:3163444/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:4103310/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:3012928/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:4824494/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:294989/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:4538830/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:4803505/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:266555/1‑100 (MQ=255)

                                                                gTAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCAATGt                                >  1:4359449/1‑100 (MQ=255)

                                                                atAGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGt                                >  1:5339081/2‑100 (MQ=255)

                                                                  atgagtgaTTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCa                              >  1:1199627/8‑100 (MQ=255)

                                                                  atctGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCa                              >  1:1324320/4‑100 (MQ=255)

                                                                  aGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCa                              >  1:4674235/1‑100 (MQ=255)

                                                                  aGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCa                              >  1:911233/1‑100 (MQ=255)

                                                                  aGATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCa                              >  1:767716/1‑100 (MQ=255)

                                                                   gATGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGCATTAATCAAGGTGACATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAg                             >  1:148025/1‑100 (MQ=255)

                                                                   gATGGCATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAg                             >  1:178034/1‑100 (MQ=255)

                                                                    ctGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGa                            >  1:4713223/2‑100 (MQ=255)

                                                                    aTGGTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGa                            >  1:2870455/1‑100 (MQ=255)

                                                                      ggTATTGATCATGAAATCATGAATAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGATg                          >  1:1226338/1‑100 (MQ=255)

                                                                                 tgaaatcatgaaTAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGATGTAAACAACACg               >  1:3988870/1‑100 (MQ=255)

                                                                                 tgaaatcatgaaTAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGATGTAAACAACACg               >  1:2194992/1‑100 (MQ=255)

                                                                                    tatcattaaTAACGCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGATGTAAACAACTCGGAt            <  1:5122545/99‑1 (MQ=255)

GCGTCAAACGCATTTATTAAGTACGATTCAGCATAAAGTACAAACATTTGTCACTACGACATCTGTAGATGGTATTGATCATGAAATCATGAATAACCCTAAATTGTATCGTATTAATCAAGGTGAAATTATAAAGTAACAGAAAGCGATGGTGACTGCATTGTCAGATGTAAACAACACGGATAATTATGGTG  >  NC_007793/4913‑5106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`