| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,533,312 | A→T | intergenic (‑165/+92) | SAUSA300_RS07445 ← / ← SAUSA300_RS07450 | 30S ribosomal protein S1/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,533,312 | 0 | A | T | 99.2% | 347.5 / ‑4.2 | 121 | intergenic (‑165/+92) | SAUSA300_RS07445/SAUSA300_RS07450 | 30S ribosomal protein S1/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (1/119); minor base . (0/1); total (1/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.19e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
TACCTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTATGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGTCATTTCATT > NC_007793/1533216‑1533408 | tACCTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGt < 1:5716127/100‑1 (MQ=255) cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATc < 1:5716564/100‑1 (MQ=255) cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATc < 1:1588456/100‑1 (MQ=255) cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATc < 1:3457675/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:3375163/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:2033682/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:62213/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:3002466/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:5312101/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:3648430/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:1318407/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:3713083/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:3715017/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:4205232/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:4261905/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:483993/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa < 1:4797405/100‑1 (MQ=255) cGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCag < 1:846687/100‑2 (MQ=255) cGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCaa < 1:19349/100‑1 (MQ=255) aTTACA‑TTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGt < 1:2071395/100‑1 (MQ=255) ttACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGt < 1:955741/100‑1 (MQ=255) ttACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGt < 1:5397349/100‑1 (MQ=255) aCATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTat < 1:1839725/100‑2 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc < 1:3946343/100‑1 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc < 1:4814300/100‑1 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc < 1:1179147/100‑1 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc < 1:2793722/100‑1 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATAGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc < 1:2021074/100‑1 (MQ=255) tGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGt < 1:1472604/100‑1 (MQ=255) tGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGt < 1:900573/100‑1 (MQ=255) gCGAAATAGTCATATACATAAATATGTCACTTTATCATATTTAAGTCGTAATATCGATAAATAGTTATTACAGCCATTTTTGTATCAAAGTAATACAGtt < 1:3155433/100‑1 (MQ=255) cGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGttt < 1:3000139/100‑1 (MQ=255) aaaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTga < 1:3921685/100‑2 (MQ=255) aaaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGc < 1:1046053/100‑1 (MQ=255) aaaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTAT‑AAAGTAATACAGTTTGcc < 1:5593264/100‑2 (MQ=255) aataatCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:2814365/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATGCAGTTTGCt < 1:5203147/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:2056912/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:3766871/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:4254196/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:3943490/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:1074390/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:4036547/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:3141062/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:641867/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:4960750/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:2809703/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:1967036/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:2750053/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:217787/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGCAATACAGTTTGCt < 1:5124643/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGACATCATATCGATAAATATTTATTACAGCCATTTTTGTATCAAAGTAATACAGTTTGCt < 1:2633021/100‑1 (MQ=255) aTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTa < 1:1936624/100‑1 (MQ=255) aTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTa < 1:1419344/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTag < 1:5346024/100‑2 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTaa < 1:2271741/100‑2 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:4766573/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:5230944/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:865848/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:101605/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:763426/100‑1 (MQ=255) gTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTAtat < 1:3379109/100‑3 (MQ=255) gTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATga < 1:152257/100‑2 (MQ=255) gTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGt < 1:2288010/100‑1 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATCCAGTTTGCTATGttt < 1:3703364/100‑1 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGttt < 1:3345527/100‑1 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGttt < 1:1713795/100‑1 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGttt < 1:5434301/100‑1 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGttt < 1:4883048/100‑1 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGttt < 1:2274912/100‑1 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTT‑TGTATCAAAGTAATACAGTTTGCTATGttca < 1:2774440/100‑3 (MQ=255) atatACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGtttg < 1:4793501/100‑2 (MQ=255) tataCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCtgaaggttc < 1:3795684/100‑9 (MQ=255) tataCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtat < 1:3596746/100‑1 (MQ=255) tataCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtat < 1:4712295/100‑1 (MQ=255) tataCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtat < 1:2580106/100‑1 (MQ=255) tataCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtat < 1:4045003/100‑1 (MQ=255) tataCATAAATATGTCACTTTATCATATTCAAGTCGACATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtat < 1:1420886/100‑1 (MQ=255) tataCATAAACATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtat < 1:3312421/100‑1 (MQ=255) tAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACatat < 1:1716933/100‑1 (MQ=255) gTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGt < 1:2693864/100‑1 (MQ=255) tatTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAAttggg < 1:2177348/100‑4 (MQ=255) cgtcATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTAc > 1:1091966/1‑100 (MQ=255) atCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTAtttt < 1:5443181/100‑1 (MQ=255) aaTATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTtat < 1:4626646/100‑1 (MQ=255) atatTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTtata < 1:102998/100‑1 (MQ=255) tattaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCt < 1:1218021/100‑1 (MQ=255) tattaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCt < 1:4540862/100‑1 (MQ=255) tactaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCt < 1:716424/97‑1 (MQ=255) ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgg < 1:492630/100‑2 (MQ=255) taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTggg < 1:4281565/100‑3 (MQ=255) taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtg < 1:1714066/100‑2 (MQ=255) taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:2879943/100‑1 (MQ=255) taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:4972623/100‑1 (MQ=255) aCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGttc < 1:444961/100‑3 (MQ=255) aaCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt < 1:2899842/100‑1 (MQ=255) ccATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatttc < 1:3104398/100‑1 (MQ=255) ccATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatttc < 1:1103351/100‑1 (MQ=255) aTTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatttcat < 1:5669384/100‑1 (MQ=255) ttttTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatttcatt < 1:3886134/100‑1 (MQ=255) | TACCTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTATGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGTCATTTCATT > NC_007793/1533216‑1533408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |