D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,533,003	A→G	L49L (TTA→CTA)	SAUSA300_RS07445 ←	30S ribosomal protein S1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,533,003	0	A	G	99.6%	1494.7 / NA	548	L49L (TTA→CTA)	SAUSA300_RS07445	30S ribosomal protein S1
Reads supporting (aligned to +/- strand): ref base A (0/2); new base G (3/543); total (3/545)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 548 total aligned reads displayed.

CTTCATCAAACTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAATTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTGTC  >  NC_007793/1532913‑1533099

       aaaCTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGaata                                                                                  <  1:2102006/100‑1 (MQ=255)

                        cATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTacc                                                                 <  1:5332480/100‑1 (MQ=255)

                         atatGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTacca                                                                <  1:4477808/100‑1 (MQ=255)

                          tatGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTaccac                                                               <  1:2793302/100‑1 (MQ=255)

                             gCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGAGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGt                                                            <  1:2463976/100‑1 (MQ=255)

                              ctccAACTTCGTCGCCCTCTTTTACACCTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGtg                                                           <  1:3544942/97‑2 (MQ=255)

                               ttCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGTAATAATCCCATTAAATTTACCACCGttc                                                          <  1:3168611/100‑2 (MQ=255)

                               ttCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTg                                                          <  1:220430/100‑1 (MQ=255)

                               ttCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTg                                                          <  1:1889869/100‑1 (MQ=255)

                               ttCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTg                                                          <  1:5371004/100‑1 (MQ=255)

                                tCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTgg                                                         <  1:3474672/100‑2 (MQ=255)

                                 cttccgatctgCCCTCTTTTACAACTTCGCTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGat                                                        <  1:194460/90‑1 (MQ=255)

                                 cttccgatctgCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGat                                                        <  1:1153343/90‑1 (MQ=255)

                                 cAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGtagct                                                        <  1:2331441/100‑5 (MQ=255)

                                 cAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTggc                                                        <  1:3881757/100‑3 (MQ=255)

                                 cAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGat                                                        <  1:1593745/100‑1 (MQ=255)

                                 cAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGat                                                        <  1:4794462/100‑1 (MQ=255)

                                 cAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGag                                                        <  1:5111177/100‑2 (MQ=255)

                                   aCTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGatat                                                      <  1:4729309/100‑1 (MQ=255)

                                    cTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATg                                                     <  1:4874959/100‑1 (MQ=255)

                                    cTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATg                                                     <  1:5719258/100‑1 (MQ=255)

                                    cTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATg                                                     <  1:1344139/100‑1 (MQ=255)

                                       ttccgatctctTTTCCAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTTCCACCGTTGATATGaac                                                  <  1:1700129/93‑1 (MQ=255)

                                         tcgCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGaacag                                                <  1:1175410/100‑2 (MQ=255)

                                                   ttACAACTTCACTTGGGCTATCAATATGATGCGTTGATAGTTGACTAATAGGAATAAGCCCATTAAAATTGCCACCGTTGATATGAACAACAActtgctc                                      <  1:2683133/100‑2 (MQ=255)

                                                   ttACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAActtgctt                                      <  1:2282956/100‑1 (MQ=255)

                                                    tACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAActtgcttg                                     <  1:2178577/100‑1 (MQ=255)

                                                    tACAACTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAActtgcttg                                     <  1:1627968/100‑1 (MQ=255)

                                                      cttccgatcTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAActtgcttggg                                   <  1:673400/92‑3 (MQ=255)

                                                        aCTTCACTTGGGCTATCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCtt                                 <  1:5133920/100‑1 (MQ=255)

                                                                      aTCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAGATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTAcc                   <  1:927778/100‑1 (MQ=255)

                                                                       tCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCt                  <  1:4150396/100‑1 (MQ=255)

                                                                       tCAATATGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCt                  <  1:2830212/100‑1 (MQ=255)

                                                                          atatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAGATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGc               <  1:2994072/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:343623/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:1037155/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:1089881/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:4206996/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:4114132/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:1393875/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:2377910/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:5657237/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:2431674/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:2505563/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:253963/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:2646697/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:56102/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:5756687/100‑1 (MQ=255)

                                                                           tatGATGCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGcc              <  1:5496672/100‑1 (MQ=255)

                                                                            atgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCa             <  1:5083947/100‑1 (MQ=255)

                                                                             tgatgCGTAGATAGTTGACTAATAGGAATAGTCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAg            <  1:4572374/100‑1 (MQ=255)

                                                                             tgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAg            <  1:883590/100‑1 (MQ=255)

                                                                             tgatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAg            <  1:3754739/100‑1 (MQ=255)

                                                                              gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAgg           <  1:3047505/100‑2 (MQ=255)

                                                                              gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAga           <  1:2587674/100‑2 (MQ=255)

                                                                              gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGt           <  1:4984613/100‑1 (MQ=255)

                                                                              gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGt           <  1:3929734/100‑1 (MQ=255)

                                                                              gatgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGt           <  1:5024702/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGCCTAATAGGAATAATCCCATTAAATTTACCCCCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1231798/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTCCCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:5565862/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACGACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1658604/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAggt          <  1:4045084/100‑3 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAggg          <  1:3392302/100‑3 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAgat          <  1:963730/100‑3 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGtt          <  1:851004/100‑2 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGtt          <  1:3647393/100‑2 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGtt          <  1:3584336/100‑2 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGta          <  1:5638116/100‑2 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:3330690/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1004044/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1443295/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:756679/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:1806200/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:2745901/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:551845/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:30793/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:3247703/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:5344463/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4454312/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:3514605/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:3734930/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:3847388/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4954534/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4710165/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4843274/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4232995/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4305431/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:4773693/100‑1 (MQ=255)

                                                                               atgCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTGGTTGTACCTCGCCAGta          <  1:1742919/100‑2 (MQ=255)

                                                                               atgCGTAAATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTg          <  1:5247279/100‑1 (MQ=255)

                                                                                 gCGTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGAc        <  1:2036576/100‑1 (MQ=255)

                                                                                   gTAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACtt      <  1:4620039/100‑1 (MQ=255)

                                                                                    tAGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACtta     <  1:2959427/100‑2 (MQ=255)

                                                                                    tAGATAGTTGACTAATAAGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACttt     <  1:1486144/100‑1 (MQ=255)

                                                                                     aGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTTGCCAGTGACTTTg    <  1:467810/100‑1 (MQ=255)

                                                                                     aGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACttta    <  1:2146637/100‑2 (MQ=255)

                                                                                     aGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTg    <  1:5419433/100‑1 (MQ=255)

                                                                                     aGATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTg    <  1:4075121/100‑1 (MQ=255)

                                                                                      gATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTgg   <  1:4523966/100‑2 (MQ=255)

                                                                                      gATAGTTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTGt   <  1:440954/100‑1 (MQ=255)

CTTCATCAAACTCAACTTTAGTGACATATGCTTCAACTTCGTCGCCCTCTTTTACAACTTCACTTGGGCTATCAATATGATGCGTAGATAATTGACTAATAGGAATAATCCCATTAAATTTACCACCGTTGATATGAACAACAACTTGCTTGTCTTCAACTTGTTGTACCTCGCCAGTGACTTTGTC  >  NC_007793/1532913‑1533099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`