D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,448,263	C→G	G21A (GGT→GCT)	SAUSA300_RS07160 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,448,263	0	C	G	99.8%	1541.5 / NA	568	G21A (GGT→GCT)	SAUSA300_RS07160	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/1); major base G (17/548); minor base A (0/1); total (17/551)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 580 total aligned reads displayed.

AAATCACCATGTGTCTCAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGACCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTCAC  >  NC_007793/1448167‑1448358

 aaTCACCATGTGTCTCAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCttt                                                                                             <  1:4887027/100‑1 (MQ=255)

 aaTCACCATGTGTCTCAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCttt                                                                                             <  1:882056/100‑1 (MQ=255)

          gtgtCTCAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCgtg                                                                                    <  1:5387983/100‑1 (MQ=255)

           tgtCTCAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCgtgt                                                                                   <  1:1433312/100‑1 (MQ=255)

            gtCTCAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCgtgtg                                                                                  <  1:2628949/100‑2 (MQ=255)

             tctcAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCg                                                                                 <  1:5085132/100‑1 (MQ=255)

             tctcAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCg                                                                                 <  1:4335715/100‑1 (MQ=255)

             tctcAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCg                                                                                 <  1:2586177/100‑1 (MQ=255)

              ctcAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCgc                                                                                <  1:2087632/100‑2 (MQ=255)

                cAATATAATCAGACAGTATGTTAAAATCATCACCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCgtggggcct                                                                              <  1:3738310/100‑7 (MQ=255)

                   tataATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCAct                                                                           <  1:4288678/100‑2 (MQ=255)

                   tataATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCAct                                                                           <  1:3313956/100‑2 (MQ=255)

                   tataATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCAca                                                                           <  1:2161184/100‑2 (MQ=255)

                   tataATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCAca                                                                           <  1:1797286/100‑2 (MQ=255)

                   tataATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACg                                                                           <  1:979777/100‑1 (MQ=255)

                   tataATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACg                                                                           <  1:1556089/100‑1 (MQ=255)

                    ataATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCAcaa                                                                          <  1:4565644/100‑3 (MQ=255)

                    ataATCAGACAGTATGTTAAAATCATCATCGTGTTTTCGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGCCGAGCTTTATCGTCGTGTCGACCagtt                                                                          <  1:1386122/100‑4 (MQ=255)

                         cAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTgg                                                                     <  1:3684599/100‑2 (MQ=255)

                         cAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTgg                                                                     <  1:4536183/100‑2 (MQ=255)

                         cAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTgc                                                                     <  1:1001326/100‑2 (MQ=255)

                         cAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGt                                                                     <  1:1085281/100‑1 (MQ=255)

                         cAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGt                                                                     <  1:2806194/100‑1 (MQ=255)

                          aggcAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:2384517/97‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:2487769/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:5548367/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:5148756/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:1686216/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:3447553/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:1220352/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:246688/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:225391/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:698783/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:4118479/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:1916708/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:4241031/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:1652165/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:4461569/100‑1 (MQ=255)

                          aGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCCCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:4750722/100‑1 (MQ=255)

                          aGACAGTATGTGAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTc                                                                    <  1:5620572/100‑1 (MQ=255)

                           gACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGGCCACGAACTGTCa                                                                   <  1:4089030/100‑1 (MQ=255)

                           gACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCTCGAACTGTCa                                                                   <  1:1751511/100‑1 (MQ=255)

                           gACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCa                                                                   <  1:1328481/100‑1 (MQ=255)

                           gACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTCCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCa                                                                   <  1:3527471/100‑1 (MQ=255)

                            aCAGTATGTTAAGATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:739417/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCac                                                                  <  1:284462/100‑2 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCac                                                                  <  1:3060357/100‑2 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCaa                                                                  <  1:3001724/100‑2 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:2541381/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:1178265/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:84514/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:5351430/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:3917502/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:1349657/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:3627202/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:2755217/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:3352729/100‑1 (MQ=255)

                            aCAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCAt                                                                  <  1:5586214/100‑1 (MQ=255)

                            aCAGTATGTGAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTACCGTCGTGTCGTCCACGAACTGTCAt                                                                  <  1:4172971/100‑1 (MQ=255)

                             cggTATGTTAAAATCATCATCGTGTTTTGAGAAAGCAAGAACGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:4032872/98‑1 (MQ=255)

                             cAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:5719731/100‑1 (MQ=255)

                             cAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:4860732/100‑1 (MQ=255)

                             cAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:3856868/100‑1 (MQ=255)

                             cAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:5779374/100‑1 (MQ=255)

                             cAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:4781669/100‑1 (MQ=255)

                             cAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:5214557/100‑1 (MQ=255)

                             cAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATg                                                                 <  1:948055/100‑1 (MQ=255)

                              aatATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATgg                                                                <  1:3392565/98‑2 (MQ=255)

                              aGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATgt                                                                <  1:4644905/100‑2 (MQ=255)

                              aGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATgg                                                                <  1:2907625/100‑2 (MQ=255)

                              aGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATgc                                                                <  1:1262005/100‑2 (MQ=255)

                              aGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGa                                                                <  1:3244122/100‑1 (MQ=255)

                              aGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGa                                                                <  1:2002459/100‑1 (MQ=255)

                               gTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGat                                                               <  1:5020064/100‑2 (MQ=255)

                               gTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGAc                                                               <  1:3760171/100‑1 (MQ=255)

                               gTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGAc                                                               <  1:543960/100‑1 (MQ=255)

                               gTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGAc                                                               <  1:2701947/100‑1 (MQ=255)

                                tATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGagg                                                              <  1:4404197/100‑3 (MQ=255)

                                tATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACa                                                              <  1:3583169/100‑1 (MQ=255)

                                tATGTTAAAATCATCATCGTGTCTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACa                                                              <  1:1044458/100‑1 (MQ=255)

                                 aTGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACag                                                             <  1:3215970/100‑2 (MQ=255)

                                 aTGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACaa                                                             <  1:1133327/100‑1 (MQ=255)

                                  tGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGTTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACaag                                                            <  1:2208614/100‑2 (MQ=255)

                                  tGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACaac                                                            <  1:5684092/100‑2 (MQ=255)

                                                  gtgtTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAg                                            <  1:5288514/100‑1 (MQ=255)

                                                                      cGTCAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTc                        <  1:3096272/100‑1 (MQ=255)

                                                                         cAAATATCTCTTCTGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTcaca                     <  1:2929784/100‑1 (MQ=255)

                                                                                  cttctGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATATTTTTTCATTATTTCATTGTCACATCAATCACt            <  1:5496458/100‑1 (MQ=255)

                                                                                  cttctGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACt            <  1:3966639/100‑1 (MQ=255)

                                                                                   ctctGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACtt           >  1:5462364/2‑100 (MQ=255)

                                                                                      tGCTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTg        <  1:3811869/100‑1 (MQ=255)

                                                                                        cTAGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGCTCATTGTCACATCAATCACtttgttt      <  1:634974/100‑5 (MQ=255)

                                                                                          aGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTc    <  1:413498/100‑1 (MQ=255)

                                                                                          aGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTc    <  1:1295334/100‑1 (MQ=255)

                                                                                          aGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTc    <  1:1495808/100‑1 (MQ=255)

                                                                                          aGACGAGCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTc    <  1:229945/100‑1 (MQ=255)

                                                                                           gacgagCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTCa   <  1:2675258/100‑1 (MQ=255)

                                                                                            acgagCTTTATCGTCGTGTCGACCGCGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTCag  <  1:4609444/100‑2 (MQ=255)

                                                                                            acgagCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTCAc  <  1:1872010/100‑1 (MQ=255)

                                                                                            acgagCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTCAc  <  1:2880656/100‑1 (MQ=255)

AAATCACCATGTGTCTCAATATAATCAGACAGTATGTTAAAATCATCATCGTGTTTTGGGAAAGCAAGATCGTCAAATATCTCTTCTGCTAGACGACCTTTATCGTCGTGTCGACCACGAACTGTCATGACAAATTGATAAAACGAATAGTTTTTCATTAGTTCATTGTCACATCAATCACTTTTGTTTCAC  >  NC_007793/1448167‑1448358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`