| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,329,695 | C→T | C7C (TGC→TGT) | SAUSA300_RS06540 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,329,695 | 0 | C | T | 100.0% | 20.5 / NA | 9 | C7C (TGC→TGT) | SAUSA300_RS06540 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (4/5); total (4/5) | |||||||||||
GAACTCGTAGCATGGGGATAAAGAAAGTTTACTTTAAAAATTTTAACCTTCAAATGTGAAGGTTATTTTTTATTGCCCAAAACGTGCTGATGACATTTTAAAAGCAAGTATGGAATATCAGTCGACAGACTATAAACGGAGGTATATCTCATGGAAAACAATGATAGCAATG > NC_007793/1329620‑1329791 | gAACTCGTAGCATGGGGATAAAGAAAGTTTACTTTAAAAATTTTAACCTTCAAATGTGAAGGTTATTTTTTATTGTCCAAAACGTGCTGATGACATTTTa > 1:4761522/1‑100 (MQ=255) cGTAGCATGGGGATAAAGAAAGTTTACTTTAAAAATTTTAACCTTCAAATGTGAAGGTTATTTTTTATTGTCCAAAACGTGCTGATGACATTTTAAAAGc > 1:444325/1‑100 (MQ=255) acATGGGGATAAAGAAAGTTTACTTTAAAAATTTTAACCTTCAAATGTGAAGGTTATTTTTTATTGTCCAAAACGTGCTGATGACATTTTAAAAGCAAGt > 1:66994/2‑100 (MQ=255) cATGGGGATAAAGAAAGTTTACTTCAAAAATTTTAACCTTCAAGTGTGAAGGTTATTTTTTATTGTCCAAAACGTGCTGATGACATTTTAAAAGCAAGTa > 1:1225826/1‑100 (MQ=255) aaagaaagTTTACTTTAAAAATTTTAACCTTCAAATGTGAAGGTTATTTTTTATTGTCCAAAACGTGCTGATGACATTTTAAAAGCAAGTACGGAATATc < 1:1001098/100‑1 (MQ=255) aaCCTTCAAATGTGAAGGTTATTTTTTATTGTCCAAAACGTGCTGATGACATTTTAAAAGCAAGTATGGAATATCAGTCGACAGACTATAAACGGAGGta < 1:2771333/100‑1 (MQ=255) cTTCAAATGTGAAGGTTATTTTTTATTGTCCAAAACGTGCTGATGACATTTTAAAAGCAAGTATGGAATATCAGTCGACAGACTATAAACGGAGGTatat < 1:5024348/100‑1 (MQ=255) ttttttATTGTCCAAAACGTGCTGATGACATTTTAAAAGCAAGTATGGAATATCAGTCGACAGACTATAAACGGAGGTATATCTCATGGAAAACAATGAt < 1:5145088/100‑1 (MQ=255) ttGTCCAAAACGTGCTGATGACATTTTAAAAGCAAGTATGGAATATCAGTCGACAGACTATAAACGGAGGTATATCTCATGGAAAACAATGATAGCAATg < 1:1991072/100‑1 (MQ=255) | GAACTCGTAGCATGGGGATAAAGAAAGTTTACTTTAAAAATTTTAACCTTCAAATGTGAAGGTTATTTTTTATTGCCCAAAACGTGCTGATGACATTTTAAAAGCAAGTATGGAATATCAGTCGACAGACTATAAACGGAGGTATATCTCATGGAAAACAATGATAGCAATG > NC_007793/1329620‑1329791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |