Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,197,614 A→G E363G (GAA→GGA)  SAUSA300_RS05930 → dihydroorotase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,197,6140AG100.0% 419.8 / NA 145E363G (GAA→GGA) SAUSA300_RS05930dihydroorotase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (142/3);  total (142/3)

Only 100 of 145 total aligned reads displayed.

ATACGCATTTTGTAAAAAATGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGAATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGATTTCTTATCAAAAGC  >  NC_007793/1197527‑1197710
                                                                                       |                                                                                                
ataCGCATTTTGTAAAAAATGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACAtt                                                                                      >  1:4884321/1‑100 (MQ=255)
 taCGCATTTTGTAAAAAATGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGcacagat                                                                                     >  1:2844/1‑97 (MQ=255)
 taCGCATTTTGTAAAAAATGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTa                                                                                     >  1:4596224/1‑100 (MQ=255)
           gTAAAAAATGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATg                                                                           >  1:1187169/1‑100 (MQ=255)
           gTAAAAAATGGTGATTGGACATTACAACAATTAGCAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATg                                                                           >  1:771595/1‑100 (MQ=255)
                gaaTGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTAt                                                                      >  1:4728879/2‑100 (MQ=255)
                ctaTGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTAt                                                                      >  1:1548785/3‑100 (MQ=255)
                aaaTGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTAt                                                                      >  1:1541094/1‑100 (MQ=255)
                 aaTGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATg                                                                     >  1:2042364/1‑100 (MQ=255)
                  gtGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGc                                                                    >  1:2985548/2‑100 (MQ=255)
                  aTGGGGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGc                                                                    >  1:1182432/1‑100 (MQ=255)
                   tGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATATGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCa                                                                   >  1:3738102/1‑100 (MQ=255)
                   aggTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCa                                                                   >  1:978906/2‑100 (MQ=255)
                    ggTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAg                                                                  >  1:2380292/1‑100 (MQ=255)
                    ggTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAg                                                                  >  1:2106611/1‑100 (MQ=255)
                      tGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGAt                                                                >  1:5187197/1‑100 (MQ=255)
                        tatGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGAttt                                                              >  1:871148/3‑100 (MQ=255)
                        cttGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGAttt                                                              >  1:5314414/2‑100 (MQ=255)
                         ttGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGAtcgg                                                             >  1:958567/1‑97 (MQ=255)
                         ttGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTa                                                             >  1:4974271/1‑100 (MQ=255)
                         ttGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTa                                                             >  1:4543902/1‑100 (MQ=255)
                          tGGACATTACAGCAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:3810499/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTATAAGAAAATGGTTATGCAGATTTaa                                                            >  1:616453/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:2168969/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:2611806/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:727984/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:1245055/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:809660/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:867892/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:3599947/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:1917464/1‑100 (MQ=255)
                          tGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:971980/1‑100 (MQ=255)
                          aggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTaa                                                            >  1:3472481/2‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGATACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:5602574/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACGTTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:408708/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTacc                                                           >  1:1454396/1‑98 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:3270605/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:3754319/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:1931613/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:3698010/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:2039992/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:3491213/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:857806/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:4378027/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:2171351/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:4951440/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:713210/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:655250/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:2982135/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:2945040/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:2379698/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:1712505/1‑100 (MQ=255)
                           ggACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAAc                                                           >  1:5381209/1‑100 (MQ=255)
                                 tACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCAt                                                     >  1:1850656/1‑100 (MQ=255)
                                 tACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCAt                                                     >  1:4176203/1‑100 (MQ=255)
                                  tcaacaaTTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCAtt                                                    >  1:896695/2‑100 (MQ=255)
                                  acaacaATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCAtt                                                    >  1:2789627/1‑100 (MQ=255)
                                  acaacaATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCAtg                                                    >  1:525425/1‑99 (MQ=255)
                                    cacaaTTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGa                                                  >  1:5238072/2‑100 (MQ=255)
                                       taTTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGAttt                                               >  1:3872392/2‑100 (MQ=255)
                                          tagtagATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGa                                            >  1:5458554/1‑100 (MQ=255)
                                           agtagATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGAt                                           >  1:2851054/1‑100 (MQ=255)
                                              agATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGt                                        >  1:3384754/1‑100 (MQ=255)
                                                tttACTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGa                                      >  1:2307310/2‑100 (MQ=255)
                                                   aCTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACa                                   >  1:2547761/1‑100 (MQ=255)
                                                    cTTAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACaa                                  >  1:3037099/1‑100 (MQ=255)
                                                      tAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGa                                >  1:4927680/1‑100 (MQ=255)
                                                      tAACAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGa                                >  1:4818633/1‑100 (MQ=255)
                                                      tAACAATTAAACCATGTGAGACATTTAATTTAGGACACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGa                                >  1:1178293/1‑100 (MQ=255)
                                                       aaCAATTAAACCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGaa                               >  1:1318381/1‑100 (MQ=255)
                                                           agtggaCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTa                           >  1:3112349/6‑100 (MQ=255)
                                                              gaaCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTaagg                        >  1:4758490/2‑98 (MQ=255)
                                                              gaaCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAg                        >  1:2027719/2‑100 (MQ=255)
                                                              ctaCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAg                        >  1:2842345/3‑100 (MQ=255)
                                                              aaaCCATGTGAGACATTTAATTTAGGATACGGCACCTTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAg                        >  1:430157/1‑100 (MQ=255)
                                                              aaaCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAg                        >  1:3045700/1‑100 (MQ=255)
                                                              aaaCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAg                        >  1:1766410/1‑100 (MQ=255)
                                                               tgccATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAACATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAgg                       >  1:2184646/3‑100 (MQ=255)
                                                               gaCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAgg                       >  1:3641554/2‑100 (MQ=255)
                                                                gccttgtgAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGga                      >  1:2373344/5‑100 (MQ=255)
                                                                aCCATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGga                      >  1:2102051/1‑100 (MQ=255)
                                                                 ccATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGgag                     >  1:5063953/1‑100 (MQ=255)
                                                                  cttgtgAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGgaga                    >  1:1486946/3‑100 (MQ=255)
                                                                  cATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGgaga                    >  1:5312239/1‑100 (MQ=255)
                                                                  cATGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGgaga                    <  1:567433/100‑1 (MQ=255)
                                                                   aTGTGAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGgagtc                   <  1:1900778/100‑3 (MQ=255)
                                                                    tgtgAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGagaag                  >  1:465983/1‑100 (MQ=255)
                                                                     gtgAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAACGGagaaga                 >  1:1634362/1‑100 (MQ=255)
                                                                      tgAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAt                >  1:4288341/1‑100 (MQ=255)
                                                                      tgAGACATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATCGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAt                >  1:1740135/1‑100 (MQ=255)
                                                                       gagaCATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCTTTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAtt               >  1:3629250/1‑100 (MQ=255)
                                                                       gagaCATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAtt               >  1:2260130/1‑100 (MQ=255)
                                                                       gagaCATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAtt               >  1:3380829/1‑100 (MQ=255)
                                                                        tgaCATTTAATTTAGGGTACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAATGGAGAAGAtcg              >  1:3703652/2‑98 (MQ=255)
                                                                        agaCATTTAATTTAGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAttt              >  1:5475153/1‑100 (MQ=255)
                                                                             gctaatttaGGATACGGCACATTAAAAGTAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGTGAAGATTTCTTAt         >  1:2221282/3‑100 (MQ=255)
                                                                                aatttaGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAtcggaagagca      >  1:512104/1‑90 (MQ=255)
                                                                                aatttaGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGAtcggaagagca      >  1:465507/1‑90 (MQ=255)
                                                                                 tgttaGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGATTTCTTATCaaa     >  1:1595226/3‑100 (MQ=255)
                                                                                    taGGATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGAGAACAAGAAATTAAAGGAGAAGATTTCTTATCAAAAGc  >  1:4676922/1‑100 (MQ=255)
                                                                                       |                                                                                                
ATACGCATTTTGTAAAAAATGGTGATTGGACATTACAACAATTAGTAGATTACTTAACAATTAAACCATGTGAGACATTTAATTTAGAATACGGCACATTAAAAGAAAATGGTTATGCAGATTTAACAATCATTGATTTAGATAGTGAACAAGAAATTAAAGGAGAAGATTTCTTATCAAAAGC  >  NC_007793/1197527‑1197710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑