D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,196,186	G→A	D187N (GAT→AAT)	SAUSA300_RS05925 →	aspartate carbamoyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,196,186	0	G	A	100.0%	311.3 / NA	110	D187N (GAT→AAT)	SAUSA300_RS05925	aspartate carbamoyltransferase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (106/4); total (106/4)

Only 100 of 111 total aligned reads displayed.

TAAAAATTCACGTGTCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATGATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAGGCATGGGCTTG  >  NC_007793/1196095‑1196282

tAAAAATTCACGTGTCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTa                                                                                          >  1:1214317/1‑100 (MQ=255)

tAAAAATTCACGTGTCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTa                                                                                          >  1:5187843/1‑100 (MQ=255)

        gcaccgacGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCAcc                                                                                  >  1:5575503/8‑100 (MQ=255)

        cACGTGTCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCAcc                                                                                  >  1:3278698/1‑100 (MQ=255)

           gtgtCACACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTa                                                                               >  1:3316875/1‑100 (MQ=255)

            ctacGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTAt                                                                              >  1:2756450/4‑100 (MQ=255)

            cgacGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTAt                                                                              >  1:5694315/4‑100 (MQ=255)

             gtCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATg                                                                             >  1:3543123/1‑100 (MQ=255)

             gtCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATg                                                                             >  1:3002637/1‑100 (MQ=255)

             gtCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATg                                                                             >  1:5331316/1‑100 (MQ=255)

              tagCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGt                                                                            >  1:2090966/3‑100 (MQ=255)

              tCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGt                                                                            >  1:76043/1‑100 (MQ=255)

              tCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGt                                                                            >  1:1842877/1‑100 (MQ=255)

              acGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGt                                                                            >  1:4192276/2‑100 (MQ=255)

               tgCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:25292/2‑100 (MQ=255)

               tgCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:1371447/2‑100 (MQ=255)

               tgCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:436364/2‑100 (MQ=255)

               tgCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGCAATGCTTAATAGACCAAAAGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:5552481/2‑100 (MQ=255)

               tacACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:3609868/3‑100 (MQ=255)

               cccACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:5306346/3‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:4752304/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:3164032/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:3190820/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:4857207/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:958188/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:2516697/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:485877/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:628398/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:5503023/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:5217916/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:1650896/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:5060754/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:4989561/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:4863485/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:2487216/1‑100 (MQ=255)

               cGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGCGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTa                                                                           >  1:2168964/1‑100 (MQ=255)

                gCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTCATGTaa                                                                          >  1:5654747/1‑100 (MQ=255)

                gCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGGAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTaa                                                                          >  1:3102788/1‑100 (MQ=255)

                 cACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCACATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTaaa                                                                         >  1:3742985/1‑100 (MQ=255)

                 cACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGAATTGATAATTCTTTAGAAGCACCTTATGTaaa                                                                         >  1:104392/1‑100 (MQ=255)

                  ctgtagtaATTACCATAGTTTAAAAGCATTAAGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAat                                                                        >  1:4765107/3‑100 (MQ=255)

                  aCGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAat                                                                        >  1:4237727/1‑100 (MQ=255)

                         aaTTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAgatg                                                                 >  1:1823553/1‑100 (MQ=255)

                         aaTTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAgatg                                                                 >  1:4856959/1‑100 (MQ=255)

                          aTTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAgatga                                                                >  1:1327523/1‑100 (MQ=255)

                            tACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGatgatg                                                              >  1:4412327/1‑100 (MQ=255)

                            tACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGatgatg                                                              >  1:4270238/1‑100 (MQ=255)

                            tACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGatgatg                                                              >  1:3879082/1‑100 (MQ=255)

                            tACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGatgatg                                                              >  1:1137212/1‑100 (MQ=255)

                            tACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGataatg                                                              >  1:2824508/1‑100 (MQ=255)

                             aCCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGt                                                             >  1:663214/1‑100 (MQ=255)

                              ccATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGtt                                                            >  1:3527868/1‑100 (MQ=255)

                              ccATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGtt                                                            >  1:3896600/1‑100 (MQ=255)

                              ccATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGtt                                                            >  1:1638008/1‑100 (MQ=255)

                              ccATAGTTTAAAAGCATTAGGCGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGtt                                                            >  1:4363547/1‑100 (MQ=255)

                               aaTAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGCTGTta                                                           >  1:5466458/2‑100 (MQ=255)

                                         aaGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAGCAgc                                                 <  1:2277655/100‑2 (MQ=255)

                                         aaGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAGCAgc                                                 <  1:4470456/100‑2 (MQ=255)

                                         aaGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAGCAGt                                                 <  1:3766855/100‑1 (MQ=255)

                                         aaGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGt                                                 <  1:1231357/100‑1 (MQ=255)

                                           gCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAg                                               >  1:642683/1‑100 (MQ=255)

                                             cttAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGat                                             >  1:2422952/2‑100 (MQ=255)

                                               tAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGatat                                           >  1:3379114/1‑100 (MQ=255)

                                                aGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGAtata                                          >  1:5274759/1‑100 (MQ=255)

                                                 cgTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAGACAGTAGatcgga                                         >  1:4099312/2‑96 (MQ=255)

                                                   tGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAGACAGTAGatcggaag                                       >  1:3100595/1‑94 (MQ=255)

                                                   tGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAgtt                                       >  1:107084/1‑100 (MQ=255)

                                                    gCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAGGCACCCTATGTAAATATAGATGATGTTATAGAAACAGTAGatcggaaga                                      >  1:872420/1‑93 (MQ=255)

                                                    gCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGatcggaaga                                      >  1:4925828/1‑93 (MQ=255)

                                                    gCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGatcggaaga                                      >  1:385581/1‑93 (MQ=255)

                                                    gCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAgtta                                      >  1:871599/1‑100 (MQ=255)

                                                     cAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGatcggaagag                                     >  1:1499112/1‑92 (MQ=255)

                                                      caaCGTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAgttatg                                    >  1:5495627/2‑100 (MQ=255)

                                                          gcaaTGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAgttatgttat                                >  1:1818898/3‑100 (MQ=255)

                                                          gTAATGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAgatcggaaga                                >  1:3344451/1‑91 (MQ=255)

                                                           caaTGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGttatt                               >  1:1649695/2‑100 (MQ=255)

                                                            aaTGTTTAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGttatta                              >  1:2231524/1‑100 (MQ=255)

                                                                  tAATAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAAtt                        >  1:2062895/1‑100 (MQ=255)

                                                                   aacaGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTc                       >  1:785818/4‑100 (MQ=255)

                                                                   aaTAGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTc                       >  1:1489164/1‑100 (MQ=255)

                                                                      ggCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAAc                    >  1:4836580/2‑100 (MQ=255)

                                                                      aGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATCTAGTTATGTTATTAAGAATTCAAc                    >  1:1398353/1‑100 (MQ=255)

                                                                      aGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAAc                    >  1:5231963/1‑100 (MQ=255)

                                                                      aGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAAc                    >  1:5461214/1‑100 (MQ=255)

                                                                      aGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAAc                    >  1:28889/1‑100 (MQ=255)

                                                                      aGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAAc                    >  1:1082806/1‑100 (MQ=255)

                                                                      aGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAAc                    >  1:3681939/1‑100 (MQ=255)

                                                                      aGCCCAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATG‑TATTAAGAATTCAACa                   >  1:3866584/1‑100 (MQ=255)

                                                                        cccAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACAt                  >  1:3941496/1‑100 (MQ=255)

                                                                          cAAATGCTTGGATTGATAATTCTTTAGAGGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGa                >  1:1525069/1‑100 (MQ=255)

                                                                          cAAATGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGa                >  1:445596/1‑100 (MQ=255)

                                                                           taaTGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGaa               >  1:3835883/2‑100 (MQ=255)

                                                                           aaaTGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGaa               >  1:5170185/1‑100 (MQ=255)

                                                                           aaaTGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGaa               >  1:492476/1‑100 (MQ=255)

                                                                            aaTGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGaaa              >  1:4556630/1‑100 (MQ=255)

                                                                            aaTGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGaaa              >  1:2721050/1‑100 (MQ=255)

                                                                             aTGCTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAg             >  1:5492534/1‑100 (MQ=255)

                                                                               acTTGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAGGc           >  1:779855/2‑100 (MQ=255)

                                                                                  tGGATTGATAATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAGGCATg        >  1:4017594/1‑100 (MQ=255)

                                                                                        gataatTCTTTAGAAGCACCTTATGTAAATATAGATTATGTTATAGAAACAGTAGATCTTGTTATGTTATTAAGAATTCAACATGAAAGGCATGGGCTTg  >  1:1264306/1‑100 (MQ=255)

TAAAAATTCACGTGTCGCACGTAGTAATTACCATAGTTTAAAAGCATTAGGTGCAAACGTAATGTTTAATAGCCCAAATGCTTGGATTGATGATTCTTTAGAAGCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAGGCATGGGCTTG  >  NC_007793/1196095‑1196282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`