D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,193,069	A→G	S280G (AGT→GGT)	SAUSA300_RS05910 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,193,069	0	A	G	98.8%	489.6 / ‑4.5	169	S280G (AGT→GGT)	SAUSA300_RS05910	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (162/5); total (164/5)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

Only 100 of 170 total aligned reads displayed.

CCATTAGTTGGTGATCCAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAAGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTGCTATA  >  NC_007793/1192970‑1193164

gcATTAGTTGGAGATCCAAAGCATGGACCGAAAAAGACATTGGATATTGATGGTCAAATTCTACCTGCTGGACTTATTGGATTCGAACAGCCAGTAACaa                                                                                                 >  1:3883179/2‑100 (MQ=255)

  aTTAGTTGGTGATCCAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGt                                                                                               >  1:5479359/1‑100 (MQ=255)

   ttAGTTGGTGATCCAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTg                                                                                              >  1:2866356/1‑100 (MQ=255)

    tAGTTGGTGATCCAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGa                                                                                             >  1:269929/1‑100 (MQ=255)

         agtagcccAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAatata                                                                                        >  1:2993295/7‑100 (MQ=255)

           gtgcccAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATAtt                                                                                      >  1:874123/5‑100 (MQ=255)

               ccAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGaaa                                                                                  >  1:4596136/1‑100 (MQ=255)

               ccAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGaaa                                                                                  >  1:761105/1‑100 (MQ=255)

                  aaGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGat                                                                               >  1:3206792/1‑99 (MQ=255)

                   ggTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACa                                                                              >  1:1165434/2‑100 (MQ=255)

                   aGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACa                                                                              >  1:1612685/1‑100 (MQ=255)

                    tgctGGACCGAAAAAGACATTGGATATTGGAGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACAt                                                                             >  1:2247976/4‑100 (MQ=255)

                    gTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACAt                                                                             >  1:1371401/1‑100 (MQ=255)

                    ctATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGatcg                                                                             >  1:5573872/2‑97 (MQ=255)

                     tATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATg                                                                            >  1:1622953/1‑100 (MQ=255)

                      ttGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:5623650/2‑100 (MQ=255)

                      ctGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:2449974/2‑100 (MQ=255)

                      ctGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATCGAAAGACATGc                                                                           >  1:3099780/2‑100 (MQ=255)

                      ctGGACCGAAAAAGACATTGGATATTGGTGCTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:4737041/2‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:5574436/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:5616714/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:5436834/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:398856/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:2764121/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:47550/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:4914795/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:5132705/1‑100 (MQ=255)

                      aTGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATCGGATTCGAACATCCAGCAACAGGTGAATATATTGAAAGACATGc                                                                           >  1:1329684/1‑100 (MQ=255)

                       tGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCt                                                                          >  1:3904238/1‑100 (MQ=255)

                       tGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGCGAATATATTGAAAGACATGCt                                                                          >  1:4613879/1‑100 (MQ=255)

                       aggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCt                                                                          >  1:24594/2‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGTTATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:846854/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:3724385/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:3152301/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:348765/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:1010950/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:5336018/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:5599454/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:1938818/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:937855/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:1215581/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACACGCTg                                                                         >  1:2462870/1‑100 (MQ=255)

                        ggACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACCTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTg                                                                         >  1:4655131/1‑100 (MQ=255)

                         taCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGa                                                                        >  1:2472377/2‑100 (MQ=255)

                         aaCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGa                                                                        >  1:1460061/2‑100 (MQ=255)

                          aCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGaa                                                                       >  1:3203754/1‑100 (MQ=255)

                          aCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGaa                                                                       >  1:2270759/1‑100 (MQ=255)

                          aCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGaa                                                                       >  1:422963/1‑100 (MQ=255)

                          aCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGaa                                                                       >  1:4134223/1‑100 (MQ=255)

                          aCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGaa                                                                       >  1:1851380/1‑100 (MQ=255)

                          aCCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGaa                                                                       >  1:3798935/1‑100 (MQ=255)

                              aaaaaGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTAc                                                                   >  1:1051498/1‑100 (MQ=255)

                                aaaGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACca                                                                 >  1:5169741/1‑100 (MQ=255)

                                 caGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACcac                                                                >  1:3970876/2‑100 (MQ=255)

                                 aaGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTAcccc                                                                >  1:2363710/1‑98 (MQ=255)

                                 aaGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACcac                                                                >  1:5148592/1‑100 (MQ=255)

                                  aGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACcaca                                                               >  1:4700922/1‑100 (MQ=255)

                                  aGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACcaca                                                               <  1:3413032/100‑1 (MQ=255)

                                  aGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACcaca                                                               <  1:628976/100‑1 (MQ=255)

                                    aCATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACcacaga                                                             >  1:3837769/1‑98 (MQ=255)

                                      aTTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGAc                                                           >  1:5763264/1‑100 (MQ=255)

                                        tGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGatcg                                                         >  1:894603/1‑97 (MQ=255)

                                        tGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACtt                                                         >  1:2391698/1‑100 (MQ=255)

                                         ggATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACttt                                                        >  1:2728839/1‑100 (MQ=255)

                                           atatTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACGTCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGa                                                      <  1:5278351/100‑1 (MQ=255)

                                               tggtggTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGAt                                                  >  1:4870326/1‑100 (MQ=255)

                                                   ggtCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATttat                                              >  1:3243894/1‑100 (MQ=255)

                                                     gcAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTTAAGAtcggaag                                            >  1:263825/2‑94 (MQ=255)

                                                       taGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGa                                          >  1:1230167/2‑100 (MQ=255)

                                                          ctctACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATAc                                       <  1:4179158/100‑1 (MQ=255)

                                                           cctACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACa                                      >  1:1324002/2‑100 (MQ=255)

                                                            ctACATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACaa                                     >  1:3454569/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAGGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:1798784/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGCCTTTGAAGATTTATTAGATACagat                                   >  1:5016889/1‑97 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGaagatcgg                                   >  1:4081751/1‑93 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATAcgaga                                   >  1:5129683/1‑96 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACagat                                   >  1:5538116/1‑97 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACagat                                   >  1:5276400/1‑97 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACaaga                                   >  1:300001/1‑98 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACaact                                   >  1:4348162/1‑98 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:723564/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:5625759/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:397306/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:1679940/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:1300603/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:3586819/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:2937637/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:2095160/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:2283990/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:4345716/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:2580671/1‑100 (MQ=255)

                                                              aCATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAAtt                                   >  1:2674897/1‑100 (MQ=255)

                                                               cATGCTGGACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATATAATTc                                  >  1:4974940/1‑100 (MQ=255)

                                                                      gACTTATTGGATTCGAACATCCAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCgtagatc                           >  1:1901894/1‑94 (MQ=255)

                                                                                          ccAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTg       >  1:200454/1‑100 (MQ=255)

                                                                                          ccAGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTg       >  1:4433090/1‑100 (MQ=255)

                                                                                            aGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTGCt     >  1:3351802/1‑100 (MQ=255)

                                                                                            aGTAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTGCt     >  1:4671115/1‑100 (MQ=255)

                                                                                             atAACAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATCTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTGCta    >  1:4862109/2‑100 (MQ=255)

                                                                                               aaCAGGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTGCtata  >  1:452855/1‑100 (MQ=255)

CCATTAGTTGGTGATCCAAAGTATGGACCGAAAAAGACATTGGATATTGGTGGTCAAGCTCTACATGCTGGACTTATTGGATTCGAACATCCAGTAACAAGTGAATATATTGAAAGACATGCTGAATTACCACAAGACTTTGAAGATTTATTAGATACAATTCGAAAAAGAGATGCATAATTGTGTCGTGCTATA  >  NC_007793/1192970‑1193164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`