D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,165,923	T→G	intergenic (+126/+179)	SAUSA300_RS05770 → / ← SAUSA300_RS05775	membrane protein/permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,165,923	0	T	G	100.0%	876.6 / NA	300	intergenic (+126/+179)	SAUSA300_RS05770/SAUSA300_RS05775	membrane protein/permease
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (297/3); total (297/3)

Only 100 of 301 total aligned reads displayed.

TGTCAACTATTACAAAGACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAG  >  NC_007793/1165826‑1166019

tGTCAACTATTACAAAGACTAAAATAAAAATCTTTATTAATTATTTTGTTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGgtt                                                                                                >  1:3204759/1‑100 (MQ=255)

   cAACTATTACAAAGACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTaga                                                                                             >  1:746189/1‑100 (MQ=255)

     aCTATTACAAAGACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGt                                                                                           >  1:4675865/1‑100 (MQ=255)

     aCTATTACAAAGACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAACCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGt                                                                                           >  1:5483498/1‑100 (MQ=255)

           aCAAAGACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACg                                                                                     >  1:2752375/1‑100 (MQ=255)

           aCAAAGACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACg                                                                                     >  1:1267823/1‑100 (MQ=255)

                gACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGttt                                                                                <  1:1138785/100‑1 (MQ=255)

                                                ttGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAg                                                >  1:663599/1‑100 (MQ=255)

                                                 tGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGc                                               >  1:3410479/1‑100 (MQ=255)

                                                 tGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGc                                               >  1:5669704/1‑100 (MQ=255)

                                                 tGGTATATTAGCCTTGGCGTTTGCTGCCTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGc                                               >  1:4376877/1‑100 (MQ=255)

                                                  ggTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCt                                              >  1:3546724/1‑100 (MQ=255)

                                                  ggTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCt                                              >  1:1836485/1‑100 (MQ=255)

                                                  ggTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCt                                              >  1:4963157/1‑100 (MQ=255)

                                                       gctAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGt                                         >  1:3659635/3‑100 (MQ=255)

                                                       atTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGt                                         >  1:1556591/1‑100 (MQ=255)

                                                       atTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGt                                         >  1:5535897/1‑100 (MQ=255)

                                                        ttAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:4634484/1‑100 (MQ=255)

                                                        ttAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:2070164/1‑100 (MQ=255)

                                                        ttAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:2487510/1‑100 (MQ=255)

                                                        ctAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:3392587/2‑100 (MQ=255)

                                                        ctAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:3246241/2‑100 (MQ=255)

                                                        atAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:3778442/2‑100 (MQ=255)

                                                        atAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:5463284/2‑100 (MQ=255)

                                                        atAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:3067560/2‑100 (MQ=255)

                                                        atAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:4122119/2‑100 (MQ=255)

                                                        atAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTc                                        >  1:4253118/2‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGGACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:1253541/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAgatc                                       >  1:2238929/1‑97 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:2463029/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:5053935/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:5586859/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:2839540/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:4005080/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:2030429/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:3003062/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:5079836/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:1715079/1‑100 (MQ=255)

                                                         tAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCa                                       >  1:3235744/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGAGGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:5304472/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGccgtcagatc                                      >  1:2577718/1‑91 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAgatcg                                      >  1:826918/1‑96 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAgatcg                                      >  1:1401270/1‑96 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTctg                                      >  1:5033982/1‑98 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:3921883/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:5636291/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:4797157/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:1022703/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:3436718/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:1119354/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:1423066/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:1648838/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:2193781/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAg                                      >  1:2657858/1‑100 (MQ=255)

                                                          aGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTAAgatcg                                      >  1:5174641/1‑96 (MQ=255)

                                                          aGCCGTGGCGTTTGCTGATTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTATTATAGCTTTAGGCAg                                      >  1:2868214/1‑100 (MQ=255)

                                                            ctttGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGaa                                    >  1:600570/3‑100 (MQ=255)

                                                            ccTTGGCGTTTGCTGTTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAgatcgga                                    >  1:490706/1‑94 (MQ=255)

                                                            ccTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAgatcgga                                    >  1:5347392/1‑94 (MQ=255)

                                                            ccTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGaa                                    >  1:2270547/1‑100 (MQ=255)

                                                            acTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGaa                                    >  1:5700116/2‑100 (MQ=255)

                                                             cTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAgatcggaa                                   >  1:1867099/1‑93 (MQ=255)

                                                              ttGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGatcg                                  >  1:2141646/1‑97 (MQ=255)

                                                              ttGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAgg                                  >  1:3370730/1‑100 (MQ=255)

                                                               tGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAgatcgggaag                                 >  1:4690215/1‑91 (MQ=255)

                                                               tGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGt                                 >  1:4162674/1‑100 (MQ=255)

                                                               tGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGt                                 >  1:2427654/1‑100 (MQ=255)

                                                               tGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGt                                 >  1:2930685/1‑100 (MQ=255)

                                                               tGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGt                                 >  1:3603422/1‑100 (MQ=255)

                                                               tGGCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGCTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGt                                 >  1:4733311/1‑100 (MQ=255)

                                                               tGGCGTTTGCTGCTTACATATTATTTAAATAAAGGTTAGAGTGAAACGCGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGt                                 >  1:1110139/1‑100 (MQ=255)

                                                                ggCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAgatc                                >  1:3579092/1‑97 (MQ=255)

                                                                ggCGTTTGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTa                                >  1:1752780/1‑100 (MQ=255)

                                                                     ttGCTGCTTATATATTATTTAAATAAAGGTTATAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCAtt                           >  1:2767334/1‑100 (MQ=255)

                                                                     ttGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAGCGTGTTTATGAACTAGACGTTCTAGTGTAGTTACTATAGCTTTAGCCAGatcggaagagc                           >  1:4403620/1‑90 (MQ=255)

                                                                     ttGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCact                           >  1:5746574/1‑98 (MQ=255)

                                                                     ttGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCaat                           >  1:1461285/1‑98 (MQ=255)

                                                                     ttGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCaat                           >  1:1211560/1‑98 (MQ=255)

                                                                     ttGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCAtt                           >  1:3325840/1‑100 (MQ=255)

                                                                     ttGCTGCTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCAtt                           >  1:1984863/1‑100 (MQ=255)

                                                                     atgctgcTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTGTGAACTAGACGTTCTAGTATAGTTACTATAGCTTTATTCAGAAGGTATCAtt                           >  1:1195146/2‑100 (MQ=255)

                                                                      tgctgcTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAGGGTagatcgg                          >  1:1075888/1‑94 (MQ=255)

                                                                      tgctgcTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTg                          >  1:449933/1‑100 (MQ=255)

                                                                      tgctgcTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCACTg                          >  1:3806812/1‑100 (MQ=255)

                                                                      tgctgcTTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGGTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGGATCATTg                          >  1:3094145/1‑100 (MQ=255)

                                                                       gctgctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGa                         >  1:5580369/1‑100 (MQ=255)

                                                                       gctgctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGa                         >  1:697748/1‑100 (MQ=255)

                                                                          gctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAGCTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATaa                      >  1:3489723/1‑100 (MQ=255)

                                                                          gctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATaa                      >  1:1527835/1‑100 (MQ=255)

                                                                          gctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATaa                      >  1:4578427/1‑100 (MQ=255)

                                                                          gctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATaa                      >  1:4299571/1‑100 (MQ=255)

                                                                          gctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATaa                      >  1:3720728/1‑100 (MQ=255)

                                                                          gctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATAGACaa                      >  1:4481314/1‑100 (MQ=255)

                                                                          gctTATATATTATTTAAATAAAGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCACTGATaa                      >  1:867233/1‑100 (MQ=255)

                                                                                      ggacaataaaGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTaaa          >  1:5435387/5‑100 (MQ=255)

                                                                                            taaaGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAag    >  1:5782689/1‑100 (MQ=255)

                                                                                            caaaGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAag    >  1:800947/2‑100 (MQ=255)

                                                                                             caaGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAaga   >  1:433357/2‑100 (MQ=255)

                                                                                             aaaGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAaga   >  1:1934167/1‑100 (MQ=255)

                                                                                              aaGGTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCATagag  >  1:5246711/1‑100 (MQ=255)

TGTCAACTATTACAAAGACTAAAATAAAAATCTTTATTAATTATTTTATTGGTATATTAGCCTTGGCGTTTGCTGCTTATATATTATTTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAG  >  NC_007793/1165826‑1166019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`