| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,158,763 | T→C | intergenic (‑124/+8) | SAUSA300_RS05735 ← / ← SAUSA300_RS05740 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,158,763 | 0 | T | C | 100.0% | 14.0 / NA | 7 | intergenic (‑124/+8) | SAUSA300_RS05735/SAUSA300_RS05740 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/5); total (2/5) | |||||||||||
AAATTTTACCTATTATATACATCATACACTTTAAAAATTATCATTTAAATAATCTGATTTGGAATTAAAGTGCATGAAGTATAAGTCACCTTCATATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACATTTGCTAGATCTGAATGTAATCTTTTGCTTAAATCA > NC_007793/1158673‑1158858 | aaaTTTTACCTATTATATACATCATACACTTTAAAAATTATCATTTAAATAATCTGATTTGGAATTAAAGTGCATGAAGTATAAGTCACCCTCATATACt < 1:5116987/100‑1 (MQ=255) catACACTTTAAAAATTATCATTTAAATAATCTGATTTGGAATTAAAGTGCATGAAGTATAAGTCACCCTCATATACTAATCAAAGAGGACGTCAACAGt < 1:3644829/100‑1 (MQ=255) gATTTGGAATTAAAGTGCATGAAGTATAAGTCACCCTCATATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACAtttac > 1:3823124/1‑98 (MQ=255) aTTTGGAATTAAAGTGCATGAAGTATAAGTCTCCCTCATATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACATTTGCt < 1:38236/100‑1 (MQ=255) aTTTGGAATTAAAGTGCATGAAGTATAAGTCACCCTCATATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACATTTGCt < 1:1784800/100‑1 (MQ=255) aTTTGGAATTAAAGTGCATGAAGTATAAGTCACCCTCATATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACATTTGCt < 1:1997090/100‑1 (MQ=255) cACCCTCATATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACATTTGCTAGATCTGAATGTAATCTTTTGCTTAAATCa > 1:4536674/1‑100 (MQ=255) | AAATTTTACCTATTATATACATCATACACTTTAAAAATTATCATTTAAATAATCTGATTTGGAATTAAAGTGCATGAAGTATAAGTCACCTTCATATACTAATCAAAGAGGACGTCAACAGTTATTTTATTAGGATTTTTAACATAAACATTTGCTAGATCTGAATGTAATCTTTTGCTTAAATCA > NC_007793/1158673‑1158858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |