D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,115,164	A→G	S117S (TCA→TCG)	SAUSA300_RS05470 →	membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,115,164	0	A	G	100.0%	1285.2 / NA	473	S117S (TCA→TCG)	SAUSA300_RS05470	membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (469/4); total (469/4)

Only 100 of 473 total aligned reads displayed.

TTTAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCAGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTGGAGAAACGACATCACTGATTAAAGCA  >  NC_007793/1115068‑1115260

gttAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGtt                                                                                               >  1:2699842/2‑100 (MQ=255)

attAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGtt                                                                                               >  1:5273133/2‑100 (MQ=255)

 ttAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAACGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTta                                                                                              >  1:4927761/1‑100 (MQ=255)

 ttAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTta                                                                                              >  1:859270/1‑100 (MQ=255)

 ttAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTta                                                                                              >  1:569131/1‑100 (MQ=255)

 ctAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTta                                                                                              >  1:674498/2‑100 (MQ=255)

  tAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTGCACCGCAAATTCGGGCCATTCGCTTCGGTtat                                                                                             >  1:4668237/1‑100 (MQ=255)

  tAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtat                                                                                             >  1:3643787/1‑100 (MQ=255)

  tAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtat                                                                                             >  1:964116/1‑100 (MQ=255)

  tAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtat                                                                                             >  1:1180694/1‑100 (MQ=255)

   aGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGTTAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtata                                                                                            >  1:1842665/1‑100 (MQ=255)

   aGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtata                                                                                            >  1:1517552/1‑100 (MQ=255)

   aGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtata                                                                                            >  1:819154/1‑100 (MQ=255)

   aGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtata                                                                                            >  1:5388036/1‑100 (MQ=255)

   aGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTtata                                                                                            >  1:5168170/1‑100 (MQ=255)

    ttgttctttGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTatat                                                                                           >  1:371237/8‑100 (MQ=255)

    gCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTatat                                                                                           >  1:4613024/1‑100 (MQ=255)

    ccaacaaTTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTatat                                                                                           >  1:3966269/2‑100 (MQ=255)

     acacaaTTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATg                                                                                          >  1:4845326/3‑100 (MQ=255)

      aacaaTTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGATATATgg                                                                                         >  1:2665014/1‑100 (MQ=255)

        caaTTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGtt                                                                                       >  1:3206823/1‑100 (MQ=255)

          aTTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCt                                                                                     >  1:784661/1‑100 (MQ=255)

           ttGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTCTATGGTTCTg                                                                                    >  1:887407/1‑100 (MQ=255)

           ttGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTg                                                                                    >  1:3024589/1‑100 (MQ=255)

            tggtggTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGt                                                                                   >  1:3347857/1‑100 (MQ=255)

            tggtggAATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGGTAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGt                                                                                   >  1:2570540/1‑100 (MQ=255)

            ctgtggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGt                                                                                   >  1:700650/3‑100 (MQ=255)

             tgtggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTa                                                                                  >  1:4708169/2‑100 (MQ=255)

             tgtggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTa                                                                                  >  1:3434096/2‑100 (MQ=255)

              gtggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTAc                                                                                 >  1:2620897/1‑100 (MQ=255)

              ctggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTAc                                                                                 >  1:3530811/2‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:4807700/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:502178/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:3590002/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:5313523/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:108040/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:292937/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:2001851/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTg                                                                               >  1:2461803/1‑100 (MQ=255)

                ggtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTCCGGTTATATGGTTCTGTACTg                                                                               >  1:2980803/1‑100 (MQ=255)

                 gtATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGc                                                                              >  1:1714761/1‑100 (MQ=255)

                   aTTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTCCTGTACTGCaa                                                                            >  1:1946414/1‑100 (MQ=255)

                     tCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAAtt                                                                          >  1:4314595/1‑100 (MQ=255)

                     tCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAAtt                                                                          >  1:3480668/1‑100 (MQ=255)

                     tCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGAAAATTCGGGCCATTCGCTTCGGTTATATGGTACTGTACTGCAAtt                                                                          >  1:9098/1‑100 (MQ=255)

                     attAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAAtt                                                                          >  1:2316598/3‑100 (MQ=255)

                      ttAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTa                                                                         >  1:4884821/2‑100 (MQ=255)

                      ttAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTa                                                                         >  1:622196/2‑100 (MQ=255)

                      gtAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTa                                                                         >  1:5482353/2‑100 (MQ=255)

                      ccaGGCCTAGTTCAAATTATTACTGCATTTAAAGATACATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTa                                                                         >  1:2488716/3‑100 (MQ=255)

                      cTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTa                                                                         >  1:4543621/1‑100 (MQ=255)

                      atAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTa                                                                         >  1:505684/2‑100 (MQ=255)

                       tAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATGTGGTTCTGTACTGCAATTAc                                                                        >  1:1323318/1‑100 (MQ=255)

                       tAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTAc                                                                        >  1:765799/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACTGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:3243518/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:1008858/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:1260238/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:3283449/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:2777716/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:5539249/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:5667923/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:2232043/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:3615480/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:1195403/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:1834072/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:2412611/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:421266/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:2865659/1‑100 (MQ=255)

                        aGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:3887488/1‑100 (MQ=255)

                        aGGCCTAGTTCAAACTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACa                                                                       >  1:2090614/1‑100 (MQ=255)

                                          taCTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACtta                                                     >  1:5442061/1‑100 (MQ=255)

                                          taCTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACtta                                                     >  1:3767034/1‑100 (MQ=255)

                                          taCTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGGGTAGCAGTTTACtta                                                     >  1:4038628/1‑100 (MQ=255)

                                           aCTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttat                                                    >  1:4140926/1‑100 (MQ=255)

                                           aCTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttat                                                    >  1:4098022/1‑100 (MQ=255)

                                           aCTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttat                                                    >  1:2046312/1‑100 (MQ=255)

                                            cTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttatt                                                   >  1:428430/1‑100 (MQ=255)

                                            cTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttatt                                                   >  1:2206065/1‑100 (MQ=255)

                                             tGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttatta                                                  >  1:4445425/1‑100 (MQ=255)

                                              gCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttattat                                                 >  1:3125361/1‑100 (MQ=255)

                                              gCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACttattat                                                 >  1:1118409/1‑100 (MQ=255)

                                                      aGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGta                                         >  1:2263882/1‑100 (MQ=255)

                                                              ataATGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGtattatgccc                                 >  1:1343259/1‑96 (MQ=255)

                                                                aaTGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAg                               >  1:5724461/1‑100 (MQ=255)

                                                                aaTGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTAAACCCAg                               >  1:577917/1‑100 (MQ=255)

                                                                 aTGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCTgg                              >  1:3154421/1‑100 (MQ=255)

                                                                  tGTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGt                             >  1:175618/1‑100 (MQ=255)

                                                                   gTACACCGCAAATTCGGGCCATTCGCTTCGGTTATCTGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCGGGTg                            >  1:216159/1‑100 (MQ=255)

                                                                   gTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTg                            >  1:4391180/1‑100 (MQ=255)

                                                                   gTACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTg                            >  1:4178285/1‑100 (MQ=255)

                                                                   gTACACCGCAAATTCGGGCCATTCGCTTAGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAgggg                            >  1:1657384/1‑98 (MQ=255)

                                                                   gTACACCGCAAATTCGGGCCACTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTg                            >  1:5007959/1‑100 (MQ=255)

                                                                   gTACAAAGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAggga                            >  1:5101704/1‑98 (MQ=255)

                                                                    tACACCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTgg                           <  1:1891458/100‑1 (MQ=255)

                                                                     acacCGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTACACCCAgatcgg                          >  1:2715211/1‑95 (MQ=255)

                                                                        ccGCAAATTCGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTGGAGaa                       >  1:937517/1‑100 (MQ=255)

                                                                                 cGGGCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCGGGCGgagatcggaagagc              >  1:1283464/1‑90 (MQ=255)

                                                                                    gCCATTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTGGAGAAACGACATCACTg           >  1:1433169/1‑100 (MQ=255)

                                                                                       aTTCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTGGAGAAACGACACCACTGaga        >  1:4009991/1‑98 (MQ=255)

                                                                                         tCGCTTCGGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTGGAGAAACGACATCACTGATTaa      >  1:3810913/1‑100 (MQ=255)

TTTAGCAACAATTGGTGGTATTCTAGGCCTAGTTCAAATTATTACTGCATTTAAAGATAAATATAATGTACACCGCAAATTCGGGCCATTCGCTTCAGTTATATGGTTCTGTACTGCAATTACAGGTGTAGCAGTTTACTTATTATTATATGTATTATATCCAGGTGGAGAAACGACATCACTGATTAAAGCA  >  NC_007793/1115068‑1115260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`