Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	46,618	G→A	H301H (CAC→CAT)	SAUSA300_RS00200 ←	recombinase RecB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	46,618	0	G	A	100.0%	269.0 / NA	92	H301H (CAC→CAT)	SAUSA300_RS00200	recombinase RecB
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (8/84);  total (8/84)

TGAATAGTAACGAATACGTTTCTTAGTCCCGTCTTTAAGAGTATTCGTGGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAGTGAATAATGCCTGTAAGCAGATTCGTTCCTTTGCCATGGACTTGGGGTTTTTGACTGACTTGTTTCTTACGCATTTGTACTTTATCCCAT  >  NC_007793/46531‑46708                                                                                        |                                                                                           tGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCt                                                                                <  1:127698/100‑1 (MQ=255)  gAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTg                                                                               <  1:826191/100‑1 (MQ=255)  gAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTg                                                                               <  1:5795647/100‑1 (MQ=255)  gAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTg                                                                               <  1:5293533/100‑1 (MQ=255)   aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                                                              <  1:1132117/100‑1 (MQ=255)   aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                                                              <  1:5283752/100‑1 (MQ=255)   aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                                                              <  1:3384940/100‑1 (MQ=255)   aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                                                              <  1:5192245/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:3060149/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:2707191/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:3379911/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:4286000/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:4744140/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:4881902/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:54360/100‑1 (MQ=255)    aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                                                             <  1:849979/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGGGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:2689473/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:483448/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:4578176/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:4249817/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:3953720/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:1079708/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:3523302/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:5193883/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:317019/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:3166433/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:3582685/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:2472511/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:2016641/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:2268136/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:2287768/100‑1 (MQ=255)       gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTACTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:4684136/100‑1 (MQ=255)       gTAAAGAAGAAGTTTCTTGGTCCCAGATTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGAGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                                                          <  1:1461542/100‑1 (MQ=255)         aaCGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAg                                                                        <  1:2972676/100‑1 (MQ=255)         aaCGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAg                                                                        <  1:33126/100‑1 (MQ=255)           cGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGag                                                                      <  1:3341231/100‑2 (MQ=255)               ttcGTTTCTTGGTCCCATCTTTAAGTGAATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCTCATTGGGGAAAATGGATAATGCCTGTAAGCAGATTCgc                                                                  <  1:5411987/98‑2 (MQ=255)                 cGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGttg                                                                <  1:4197436/100‑2 (MQ=255)                   tttCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATGGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGtcgaa                                                              <  1:665437/100‑5 (MQ=255)                   tttCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGtcgaa                                                              <  1:2089892/100‑5 (MQ=255)                    ttCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCtt                                                             <  1:5309432/100‑1 (MQ=255)                        tggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTTGTTCCTTTAcc                                                         <  1:5381287/98‑1 (MQ=255)                        tggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTAcc                                                         <  1:3208722/98‑1 (MQ=255)                         ggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCa                                                        <  1:3360678/99‑1 (MQ=255)                         ggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCa                                                        >  1:579453/2‑100 (MQ=255)                         ggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCa                                                        <  1:5092173/99‑1 (MQ=255)                          gTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAt                                                       <  1:1280475/100‑1 (MQ=255)                          gTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCCGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAt                                                       <  1:3954231/100‑1 (MQ=255)                           tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAta                                                      <  1:2789511/100‑2 (MQ=255)                           tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg                                                      <  1:601284/100‑1 (MQ=255)                           tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg                                                      <  1:3896637/100‑1 (MQ=255)                           tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg                                                      <  1:751703/100‑1 (MQ=255)                           tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg                                                      <  1:4018326/100‑1 (MQ=255)                           tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg                                                      <  1:786003/100‑1 (MQ=255)                           tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg                                                      <  1:2804207/100‑1 (MQ=255)                           tCCCATCTTTAAGTGTATTCATTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAtt                                                      <  1:255606/100‑2 (MQ=255)                            cccATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATga                                                     <  1:136429/100‑2 (MQ=255)                             ccatCTTTAAGTGTATTCGTTGTGTTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCaagag                                                    <  1:2189396/97‑5 (MQ=255)                             ccatCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTAcccacac                                                    <  1:2937690/97‑6 (MQ=255)                             ccatCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATgag                                                    <  1:3953920/97‑3 (MQ=255)                              catCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTAccccttgg                                                   <  1:337996/98‑7 (MQ=255)                               atCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCTACATTGGGGACAATGGATAATGACTGTAAGCAGATTCTTTCCTTTACCATGAACt                                                  <  1:222153/99‑1 (MQ=255)                                 cTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTg                                                <  1:5708575/100‑1 (MQ=255)                                 cTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTg                                                <  1:539376/100‑1 (MQ=255)                                  tttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTgg                                               <  1:1992922/100‑1 (MQ=255)                                   ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggg                                              <  1:3387143/100‑1 (MQ=255)                                   ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggg                                              <  1:1353182/100‑1 (MQ=255)                                   ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggg                                              >  1:2815035/1‑100 (MQ=255)                                   ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggc                                              <  1:3389355/100‑2 (MQ=255)                                   ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTgat                                              <  1:777491/100‑3 (MQ=255)                                    tAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTgggg                                             <  1:1500225/100‑1 (MQ=255)                                     aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggggg                                            <  1:2039236/100‑2 (MQ=255)                                     aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGt                                            <  1:885988/100‑1 (MQ=255)                                     aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGt                                            <  1:971613/100‑1 (MQ=255)                                     aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGt                                            >  1:4959878/1‑100 (MQ=255)                                     aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGACTGTAAGCAGATTCGTTCCTTTACCATGAACTTggggg                                            <  1:5685764/100‑2 (MQ=255)                                      agtgTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGtt                                           <  1:900392/97‑1 (MQ=255)                                      agtgTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGtt                                           <  1:2708269/97‑1 (MQ=255)                                       gtgTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGttt                                          <  1:3717183/98‑1 (MQ=255)                                       gtgTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCATTTACCATGAACTTGGGGtaa                                          <  1:746529/98‑3 (MQ=255)                                              cGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTtgactg                                   <  1:2384093/100‑1 (MQ=255)                                                    aTTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTgg                             <  1:2002620/100‑2 (MQ=255)                                                            ctgcCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACg                     >  1:3294330/1‑100 (MQ=255)                                                             tgcCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGc                    <  1:156571/100‑1 (MQ=255)                                                              gcCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGCa                   >  1:446024/1‑100 (MQ=255)                                                              gcCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGCa                   >  1:5728413/1‑100 (MQ=255)                                                               ccgtAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGCAt                  >  1:2791684/4‑100 (MQ=255)                                                                       gcgcCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTTCCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGCATTTGTACta          <  1:404656/100‑2 (MQ=255)                                                                       gcgcCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGCATTTGTACtt          >  1:2553641/1‑100 (MQ=255)                                                                            acaTTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGCATTTGTACTTTATcc     <  1:3217511/100‑1 (MQ=255)                                                                               ttGGGGACAATTGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGAGGTTTTTGACTGACTTGTTTTTTACGCATTTGTACTTTATCCCAt  <  1:3718240/100‑1 (MQ=255)                                                                               ttGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGTTTTTGACTGACTTGTTTTTTACGCATTTGTACTTTATCCCAt  <  1:3788460/100‑1 (MQ=255)                                                                                        |                                                                                           TGAATAGTAACGAATACGTTTCTTAGTCCCGTCTTTAAGAGTATTCGTGGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAGTGAATAATGCCTGTAAGCAGATTCGTTCCTTTGCCATGGACTTGGGGTTTTTGACTGACTTGTTTCTTACGCATTTGTACTTTATCCCAT  >  NC_007793/46531‑46708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑