D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,055,844	T→C	L283L (TTA→TTG)	SAUSA300_RS05175 ←	quinol oxidase subunit 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,055,844	0	T	C	99.8%	4504.3 / NA	1518	L283L (TTA→TTG)	SAUSA300_RS05175	quinol oxidase subunit 2
Reads supporting (aligned to +/- strand): ref base T (0/3); new base C (7/1508); total (7/1511)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

Only 100 of 1518 total aligned reads displayed.

AGTTCGCATTTGTAATTTGAGCTTTACGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTTAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCATTAAATTCTAA  >  NC_007793/1055747‑1055936

       aTTTGTAATTTGAGCTTTACGAGCAGGTATTAATGGTTTGTCTGATACATCCTTAAACATATTTTCCTCACTAGTGAAGTTTGGATCTTTCAATTCggat                                                                                     <  1:2358894/100‑4 (MQ=255)

                          cGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCAt                                                                  <  1:1340830/100‑1 (MQ=255)

                           gAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCAtt                                                                 <  1:4368181/100‑2 (MQ=255)

                           gAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATa                                                                 <  1:1234421/100‑1 (MQ=255)

                             gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:798085/100‑1 (MQ=255)

                             gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:4183377/100‑1 (MQ=255)

                             gCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATaga                                                               <  1:4701652/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:3236227/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:3517138/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:3642/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:3769431/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:3899158/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:4137534/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:1772232/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:1706426/100‑1 (MQ=255)

                                        tGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCt                                                    <  1:5440013/100‑1 (MQ=255)

                                          gTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTgg                                                  <  1:109881/100‑1 (MQ=255)

                                          gTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTgg                                                  <  1:252998/100‑1 (MQ=255)

                                             tGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGAta                                               <  1:1270324/100‑2 (MQ=255)

                                                  gATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGACCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgcta                                          <  1:2505449/100‑2 (MQ=255)

                                                   aTACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgg                                         <  1:5120766/100‑2 (MQ=255)

                                                   aTACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgc                                         <  1:338746/100‑1 (MQ=255)

                                                   aTACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgc                                         <  1:5315766/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCGATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:3587189/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAATCGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:1822778/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGggtgct                                        <  1:75138/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4300029/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:5219270/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4458453/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:5746496/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:452295/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4553544/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:403699/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4594331/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:5178172/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4751232/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:892234/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:4954329/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:957727/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:1044454/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2593189/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2711506/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2171240/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:281100/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2098284/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:1408558/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgct                                        <  1:2955553/100‑1 (MQ=255)

                                                    tACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGgctgcg                                        <  1:19293/100‑2 (MQ=255)

                                                     acgtCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGctgctg                                       <  1:3705442/97‑1 (MQ=255)

                                                     aCATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGctgctg                                       <  1:5487666/100‑1 (MQ=255)

                                                     aCATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGctgctg                                       <  1:5404468/100‑1 (MQ=255)

                                                     aCATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGctgctg                                       <  1:1536903/100‑1 (MQ=255)

                                                     aCATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGctgctg                                       <  1:587892/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTTAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:2419301/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAGATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:3188083/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGctgctga                                      <  1:4265482/100‑2 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGTTGCTgg                                      <  1:3076962/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:5581014/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1606728/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1660719/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1890199/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:5264889/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:5013573/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:3429710/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:4794005/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1502947/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:2217141/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:652237/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:69229/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1168794/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:1122783/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:4090494/100‑1 (MQ=255)

                                                      cATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTgg                                      <  1:3972175/100‑1 (MQ=255)

                                                       aTCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggt                                     <  1:1973628/100‑2 (MQ=255)

                                                       aTCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggg                                     <  1:3283375/100‑2 (MQ=255)

                                                       aTCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGa                                     <  1:3120970/100‑1 (MQ=255)

                                                        tCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTggtt                                    <  1:4848530/100‑3 (MQ=255)

                                                        tCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGAt                                    <  1:5532412/100‑1 (MQ=255)

                                                        tCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGAt                                    <  1:3026133/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:264399/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:291336/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:83410/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:3479741/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:4916996/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:4223054/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:5068520/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:2873894/100‑1 (MQ=255)

                                                         cTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGAATAGAAGATGTATTCTGGATCGGCTGCTGGATc                                   <  1:214815/100‑1 (MQ=255)

                                                          tttAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATca                                  <  1:5629204/100‑1 (MQ=255)

                                                          tttAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATca                                  <  1:2267663/100‑1 (MQ=255)

                                                          tttAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATca                                  <  1:3857054/100‑1 (MQ=255)

                                                            tAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATcaac                                <  1:2025942/100‑1 (MQ=255)

                                                                    ttttCTTCACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCa                        <  1:2319087/100‑1 (MQ=255)

                                                                        cttcACTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCatata                    <  1:2471123/100‑2 (MQ=255)

                                                                             cTAGTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTAc               <  1:4654383/100‑1 (MQ=255)

                                                                                gTGAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCAt            <  1:56938/100‑1 (MQ=255)

                                                                                gTGAAGTTGGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTACTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCAt            <  1:3811044/100‑1 (MQ=255)

                                                                                 tgctcttccgATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCAtt           <  1:1003480/91‑1 (MQ=255)

                                                                                  gAAGTTTGGATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCagga          <  1:3340642/100‑4 (MQ=255)

                                                                                          gATCTTTCAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCATTAAATTCTaa  <  1:2769241/100‑1 (MQ=255)

AGTTCGCATTTGTAATTTGAGCTTTACGAGCAGGTATTAATGGTTTGTCTGATACATCTTTAAACATATTTTCTTCACTAGTGAAGTTTGGATCTTTTAATTCGAAATTGAAACGTTTATATGCATAGAAGATGTATTCTGGATCGGCTGCTGGATCAACAAACGCCATATGTGTACCATTAAATTCTAA  >  NC_007793/1055747‑1055936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`