D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	46,570	A→T	T317T (ACT→ACA)	SAUSA300_RS00200 ←	recombinase RecB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	46,570	0	A	T	99.3%	382.4 / ‑4.7	136	T317T (ACT→ACA)	SAUSA300_RS00200	recombinase RecB
Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (13/122); total (13/123)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.45e-01

Only 100 of 136 total aligned reads displayed.

TACACTGTTTGCCGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTAGTCCCGTCTTTAAGAGTATTCGTGGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAGTGAATAATGCCTGTAAGCAGATTCGTTCCTTTGCCATGGACTTGGGGT  >  NC_007793/46480‑46666

tACACTGTTTGCCGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGtt                                                                                         >  1:2059371/1‑99 (MQ=255)

      gTTTGCCGAACATACTTTGGAACCCTTGATCCGAAAATTAATACATGAATAGTAACGAATATCTTTCTTACTCCCATCTTTAAGTTAATTGGTTGTAttt                                                                                   >  1:4593927/1‑99 (MQ=255)

         tGCCGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGACTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTAttgctt                                                                                >  1:3671278/1‑100 (MQ=255)

         tGCCGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTAttgctt                                                                                >  1:5588906/1‑100 (MQ=255)

            cGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTAttgcttgcc                                                                             <  1:809700/100‑2 (MQ=255)

            cGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATtgcttgct                                                                             <  1:3304092/100‑1 (MQ=255)

            cGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATtgcttgct                                                                             <  1:5718924/100‑1 (MQ=255)

             gAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTtgctg                                                                            <  1:3485486/100‑1 (MQ=255)

             ccgcATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCGCATCTTTAAGTGTATTCGTTGTATTGCTtgctg                                                                            >  1:4111508/4‑100 (MQ=255)

               aCATACTTTGGGACCCTTGTTCCGAAAATTACTACATGAATAGTATCGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGcc                                                                          <  1:2249429/100‑1 (MQ=255)

               aCATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGcc                                                                          <  1:3239572/100‑1 (MQ=255)

                 aTACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCaa                                                                        <  1:1931630/100‑2 (MQ=255)

                 aTACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCAt                                                                        <  1:583825/100‑1 (MQ=255)

                 aTACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCAt                                                                        <  1:2447362/100‑1 (MQ=255)

                 aTACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTAGTCCCGTCTTTAAGAGTATTCGTGGTATTGCTTGCTGCCAt                                                                        <  1:5728062/100‑1 (MQ=255)

                  tACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCAtt                                                                       <  1:385209/100‑2 (MQ=255)

                   aCTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTTTATTCGTTGTATTGCTTGCTGCCAttc                                                                      <  1:408599/100‑3 (MQ=255)

                   aCTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAg                                                                      <  1:1591868/100‑1 (MQ=255)

                    cTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCAtcag                                                                     <  1:3847540/100‑4 (MQ=255)

                    cTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAgg                                                                     <  1:167918/100‑1 (MQ=255)

                      ttGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTg                                                                   <  1:4252133/100‑1 (MQ=255)

                      ttGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTg                                                                   <  1:3292713/100‑1 (MQ=255)

                       tGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTgc                                                                  <  1:4094137/100‑1 (MQ=255)

                       tGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTgc                                                                  <  1:2388687/100‑1 (MQ=255)

                        ggAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTgcg                                                                 <  1:796165/100‑1 (MQ=255)

                         gAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTgcgg                                                                <  1:6734/100‑2 (MQ=255)

                          aaCCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGcc                                                               <  1:902631/100‑1 (MQ=255)

                          aaCCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGcc                                                               >  1:709473/1‑100 (MQ=255)

                          aaCCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGcc                                                               <  1:3599728/100‑1 (MQ=255)

                          aaCCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGcc                                                               <  1:3608595/100‑1 (MQ=255)

                          aaCCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGcc                                                               <  1:5278371/100‑1 (MQ=255)

                            cccTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCcac                                                             <  1:5060898/100‑1 (MQ=255)

                              cTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACAt                                                           <  1:1484939/100‑1 (MQ=255)

                                 gTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTgg                                                        <  1:2285491/100‑1 (MQ=255)

                                  ttCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTgcgtcggctgtaa                                                       <  1:5654020/100‑11 (MQ=255)

                                  ttCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTggg                                                       <  1:5742892/100‑1 (MQ=255)

                                   tCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTggtg                                                      <  1:1025103/100‑3 (MQ=255)

                                   tCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTgggg                                                      <  1:4415189/100‑1 (MQ=255)

                                   tCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTgggg                                                      <  1:5330530/100‑1 (MQ=255)

                                   tCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTggag                                                      <  1:3057729/100‑3 (MQ=255)

                                   tCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTACTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTgggg                                                      <  1:1895839/100‑1 (MQ=255)

                                     cGAAAATTACTACATGAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGAc                                                    <  1:3643860/100‑1 (MQ=255)

                                                    gAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTg                                     <  1:826191/100‑1 (MQ=255)

                                                    gAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTg                                     <  1:5795647/100‑1 (MQ=255)

                                                    gAATAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTg                                     <  1:5293533/100‑1 (MQ=255)

                                                     aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                    <  1:5283752/100‑1 (MQ=255)

                                                     aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                    <  1:5192245/100‑1 (MQ=255)

                                                     aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                    <  1:3384940/100‑1 (MQ=255)

                                                     aaTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGt                                    <  1:1132117/100‑1 (MQ=255)

                                                      aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                   <  1:4881902/100‑1 (MQ=255)

                                                      aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                   <  1:4286000/100‑1 (MQ=255)

                                                      aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                   <  1:54360/100‑1 (MQ=255)

                                                      aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                   <  1:3379911/100‑1 (MQ=255)

                                                      aTAGTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTa                                   <  1:3060149/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGGGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:2689473/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:483448/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:3166433/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:1079708/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:4578176/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:2016641/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:3582685/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:317019/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:3523302/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:4249817/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:2472511/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:2268136/100‑1 (MQ=255)

                                                         gTAACGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTACTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGc                                <  1:4684136/100‑1 (MQ=255)

                                                           aaCGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAg                              <  1:2972676/100‑1 (MQ=255)

                                                             cGAATACGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGag                            <  1:3341231/100‑2 (MQ=255)

                                                                 ttcGTTTCTTGGTCCCATCTTTAAGTGAATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCTCATTGGGGAAAATGGATAATGCCTGTAAGCAGATTCgc                        <  1:5411987/98‑2 (MQ=255)

                                                                   cGTTTCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGttg                      <  1:4197436/100‑2 (MQ=255)

                                                                     tttCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATGGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGtcgaa                    <  1:665437/100‑5 (MQ=255)

                                                                     tttCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGtcgaa                    <  1:2089892/100‑5 (MQ=255)

                                                                      ttCTTGGTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCtt                   <  1:5309432/100‑1 (MQ=255)

                                                                          tggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTAcc               <  1:3208722/98‑1 (MQ=255)

                                                                           ggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCa              <  1:5092173/99‑1 (MQ=255)

                                                                           ggTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCa              <  1:3360678/99‑1 (MQ=255)

                                                                            gTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAt             <  1:1280475/100‑1 (MQ=255)

                                                                            gTCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCCGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAt             <  1:3954231/100‑1 (MQ=255)

                                                                             tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAta            <  1:2789511/100‑2 (MQ=255)

                                                                             tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg            <  1:4018326/100‑1 (MQ=255)

                                                                             tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg            <  1:2804207/100‑1 (MQ=255)

                                                                             tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg            <  1:3896637/100‑1 (MQ=255)

                                                                             tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg            <  1:751703/100‑1 (MQ=255)

                                                                             tCCCATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATg            <  1:601284/100‑1 (MQ=255)

                                                                             tCCCATCTTTAAGTGTATTCATTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCAtt            <  1:255606/100‑2 (MQ=255)

                                                                              cccATCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATga           <  1:136429/100‑2 (MQ=255)

                                                                               ccatCTTTAAGTGTATTCGTTGTGTTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCaagag          <  1:2189396/97‑5 (MQ=255)

                                                                               ccatCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATgag          <  1:3953920/97‑3 (MQ=255)

                                                                                catCTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTAccccttgg         <  1:337996/98‑7 (MQ=255)

                                                                                   cTTTAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTg      <  1:539376/100‑1 (MQ=255)

                                                                                    tttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTgg     <  1:1992922/100‑1 (MQ=255)

                                                                                     ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggg    <  1:1353182/100‑1 (MQ=255)

                                                                                     ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggg    >  1:2815035/1‑100 (MQ=255)

                                                                                     ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTggc    <  1:3389355/100‑2 (MQ=255)

                                                                                     ttAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTgat    <  1:777491/100‑3 (MQ=255)

                                                                                      tAAGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTgggg   <  1:1500225/100‑1 (MQ=255)

                                                                                       aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGt  >  1:4959878/1‑100 (MQ=255)

                                                                                       aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGCCTGTAAGCAGATTCGTTCCTTTACCATGAACTTGGGGt  <  1:885988/100‑1 (MQ=255)

                                                                                       aaGTGTATTCGTTGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAATGGATAATGACTGTAAGCAGATTCGTTCCTTTACCATGAACTTggggg  <  1:5685764/100‑2 (MQ=255)

TACACTGTTTGCCGAACATACTTTGGAACCCTTGTTCCGAAAATTACTACATGAATAGTAACGAATACGTTTCTTAGTCCCGTCTTTAAGAGTATTCGTGGTATTGCTTGCTGCCATAGGTGCGCCACATTGGGGACAGTGAATAATGCCTGTAAGCAGATTCGTTCCTTTGCCATGGACTTGGGGT  >  NC_007793/46480‑46666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`