Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 736,573 T→C Y38Y (TAT→TAC)  SAUSA300_RS03545 → membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007793736,5730TC100.0% 314.8 / NA 116Y38Y (TAT→TAC) SAUSA300_RS03545membrane protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (104/12);  total (104/12)

Only 100 of 116 total aligned reads displayed.

GGCTACTTATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTATCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGACTTTTTAGCTAA  >  NC_007793/736476‑736668
                                                                                                  |                                                                                               
ggCTACTTATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCa                                                                                               >  1:868549/1‑100 (MQ=255)
   tACTTATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAGTCTACCAGtt                                                                                            <  1:5113911/100‑1 (MQ=255)
    aCTTATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAAttt                                                                                           >  1:2057488/1‑100 (MQ=255)
      ctATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTgg                                                                                         >  1:1752007/2‑100 (MQ=255)
       tctcatcGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGc                                                                                        >  1:2669449/3‑100 (MQ=255)
       tATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGc                                                                                        >  1:2275520/1‑100 (MQ=255)
        atcatcGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCt                                                                                       <  1:3655413/100‑1 (MQ=255)
         cgatcTCTGCCCTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCtt                                                                                      <  1:5754979/98‑1 (MQ=255)
          gatcGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑CTTTTAATCTACCAATTTGGCttt                                                                                     >  1:4684466/2‑100 (MQ=255)
          catcGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCttt                                                                                     >  1:392416/1‑100 (MQ=255)
           atcGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTc                                                                                    >  1:4518740/1‑100 (MQ=255)
            tcGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCa                                                                                   >  1:3639735/1‑100 (MQ=255)
             ggCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCAt                                                                                  >  1:847678/2‑100 (MQ=255)
             cGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCAt                                                                                  >  1:2914791/1‑100 (MQ=255)
              gCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATa                                                                                 >  1:1082256/1‑100 (MQ=255)
               cTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATaa                                                                                >  1:4913541/1‑100 (MQ=255)
               cTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATaa                                                                                >  1:1197215/1‑100 (MQ=255)
               cTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATaa                                                                                >  1:73916/1‑100 (MQ=255)
               cTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑CTTTTAATCTACCAATTTGGCTTTCATaa                                                                                >  1:4166325/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCATTTTGGCTTTCATAATc                                                                              >  1:931413/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              <  1:4968565/100‑1 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              >  1:3683312/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              >  1:4064113/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              >  1:5662384/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              >  1:5701423/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              >  1:1791754/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              >  1:4028422/1‑100 (MQ=255)
                 gCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATc                                                                              >  1:445270/1‑100 (MQ=255)
                        tGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCAttg                                                                       <  1:1829505/100‑2 (MQ=255)
                          ttAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTAt                                                                     >  1:2462216/1‑100 (MQ=255)
                          tcaGCATTTGTTGGGATGATTAAGCCGATTATTCCTTCTATTTTAGGATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTAt                                                                     >  1:4593416/3‑100 (MQ=255)
                           tAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATc                                                                    >  1:3888894/1‑100 (MQ=255)
                           tAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATc                                                                    >  1:5322877/1‑100 (MQ=255)
                           caGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATc                                                                    >  1:184382/2‑100 (MQ=255)
                           atgCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATc                                                                    >  1:5376297/3‑100 (MQ=255)
                            ggCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCa                                                                   >  1:1488413/2‑100 (MQ=255)
                            aGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCa                                                                   >  1:1577342/1‑100 (MQ=255)
                            aGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCa                                                                   >  1:1612835/1‑100 (MQ=255)
                            aGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCa                                                                   >  1:5020222/1‑100 (MQ=255)
                            aGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑‑TTTTAATCTACCAATTTGCCTTTCATAATCAGCATTTATCAt                                                                  >  1:871718/1‑100 (MQ=255)
                              taTTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATg                                                                 >  1:2132378/2‑100 (MQ=255)
                                gttgttgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATggg                                                               >  1:1071891/2‑100 (MQ=255)
                                 ttgttgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGgt                                                              >  1:1559277/1‑100 (MQ=255)
                                 gtgttgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑CTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGgt                                                              >  1:4105863/2‑100 (MQ=255)
                                  tgttgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGgtg                                                             <  1:2789007/100‑1 (MQ=255)
                                  tgttgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGgtg                                                             >  1:4845921/1‑100 (MQ=255)
                                   cttgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGgtgt                                                            >  1:1623804/2‑100 (MQ=255)
                                     tgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGttt                                                          >  1:1040266/1‑100 (MQ=255)
                                     tgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGttt                                                          >  1:1284446/1‑100 (MQ=255)
                                     tgGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGttt                                                          >  1:2864541/1‑100 (MQ=255)
                                      gggTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGtttt                                                         <  1:3520356/100‑1 (MQ=255)
                                                      ttattCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCAtt                                         <  1:4329389/100‑1 (MQ=255)
                                                       atgtgcTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTg                                        >  1:211969/6‑100 (MQ=255)
                                                          cccTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTa                                     >  1:1141374/2‑100 (MQ=255)
                                                           gctccTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAACTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTaa                                    >  1:3069505/5‑100 (MQ=255)
                                                             ttCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACa                                  >  1:5096442/1‑100 (MQ=255)
                                                             ctCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACa                                  >  1:4676532/2‑100 (MQ=255)
                                                              tCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACaa                                 >  1:5471691/1‑100 (MQ=255)
                                                              tCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACaa                                 >  1:2854336/1‑100 (MQ=255)
                                                               cTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAat                                >  1:1536268/1‑100 (MQ=255)
                                                               cTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAat                                >  1:2227583/1‑100 (MQ=255)
                                                               cTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAat                                >  1:5290399/1‑100 (MQ=255)
                                                               cTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAat                                >  1:3276097/1‑100 (MQ=255)
                                                               cTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAat                                >  1:1144741/1‑100 (MQ=255)
                                                                 gtgttAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:3710214/4‑100 (MQ=255)
                                                                 gTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:5068865/1‑100 (MQ=255)
                                                                 gTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:958555/1‑100 (MQ=255)
                                                                 gTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:1272381/1‑100 (MQ=255)
                                                                 gTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:1907609/1‑100 (MQ=255)
                                                                 gTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:402986/1‑100 (MQ=255)
                                                                 gTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:3015023/1‑100 (MQ=255)
                                                                 gTTTTAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGCGTTTTATGTATCTATGGCATTGCTAACAatat                              >  1:5073294/1‑100 (MQ=255)
                                                                  ctttAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATAtt                             >  1:3925325/2‑100 (MQ=255)
                                                                    ttAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTaa                           >  1:3756667/1‑100 (MQ=255)
                                                                    ctAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTaa                           >  1:2694162/2‑100 (MQ=255)
                                                                     tAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAAt                          >  1:4894206/1‑100 (MQ=255)
                                                                     tAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAAt                          >  1:3378945/1‑100 (MQ=255)
                                                                     tAGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAAt                          >  1:518941/1‑100 (MQ=255)
                                                                      aGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAAtt                         >  1:3886277/1‑100 (MQ=255)
                                                                      aGTATTATGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAAtt                         >  1:2311279/1‑100 (MQ=255)
                                                                       ccattatGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAAttt                        >  1:2968560/3‑100 (MQ=255)
                                                                         attatGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTa                      >  1:5396289/1‑100 (MQ=255)
                                                                         agtatGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTa                      >  1:3174814/3‑100 (MQ=255)
                                                                          ttatGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTAt                     >  1:288218/1‑100 (MQ=255)
                                                                          aggtGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTAt                     >  1:2446219/4‑100 (MQ=255)
                                                                           tatGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTAtg                    >  1:3910760/1‑100 (MQ=255)
                                                                            atGGGTTGGCTTTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTAtg                    >  1:2839796/1‑100 (MQ=255)
                                                                             tGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCGCAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTAtgtg                  >  1:2033492/1‑100 (MQ=255)
                                                                             tGGGTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTAtgtg                  <  1:4557162/100‑1 (MQ=255)
                                                                             tGGGTTGGC‑CTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTAtgtg                  >  1:1253732/1‑100 (MQ=255)
                                                                              gggTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGc                 >  1:2178806/1‑100 (MQ=255)
                                                                                gTTGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCg               <  1:1154089/100‑1 (MQ=255)
                                                                                cttGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCg               >  1:541014/2‑100 (MQ=255)
                                                                                  tGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGAc             >  1:1643367/1‑100 (MQ=255)
                                                                                  tGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGAc             >  1:1314417/1‑100 (MQ=255)
                                                                                  tGGC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGAc             >  1:2815894/1‑100 (MQ=255)
                                                                                   ggC‑TTTTTAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGACt            >  1:1809125/1‑100 (MQ=255)
                                                                                   ggC‑TTTTTAATCTACCAATTTAGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGACt            >  1:333608/1‑100 (MQ=255)
                                                                                        ttttAATCTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGACttttt        <  1:2227190/100‑1 (MQ=255)
                                                                                              acTACCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATAAATTTTATGTGCCGACTTTTTAGCtaa  >  1:1777548/2‑100 (MQ=255)
                                                                                                  |                                                                                               
GGCTACTTATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTGATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGC‑TTTTTAATCTATCAATTTGGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATATTAATTTTATGTGCCGACTTTTTAGCTAA  >  NC_007793/736476‑736668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑