D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	555,081	C→T	I310I (ATC→ATT)	SAUSA300_RS02660 →	lysine‑‑tRNA ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	555,081	0	C	T	99.9%	2168.4 / NA	709	I310I (ATC→ATT)	SAUSA300_RS02660	lysine‑‑tRNA ligase
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (704/4); total (705/4)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 713 total aligned reads displayed.

ATCATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATCGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATGAAGAAG  >  NC_007793/554987‑555175

                 gtAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTc                                                                          >  1:5599245/2‑100 (MQ=255)

                  ataCAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCg                                                                         >  1:539505/3‑100 (MQ=255)

                   caCAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGTAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGt                                                                        >  1:59743/2‑100 (MQ=255)

                    aCAGAATCTATGGTGAGACATATTGCCAATGAAGTGGTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGtt                                                                       >  1:1649874/1‑100 (MQ=255)

                        aaTCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCa                                                                   >  1:5745609/1‑100 (MQ=255)

                           tgaTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCatat                                                                >  1:1939225/3‑100 (MQ=255)

                            tctGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAtt                                                               >  1:1998376/3‑100 (MQ=255)

                            cttGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAtt                                                               >  1:4864646/3‑100 (MQ=255)

                             aTGGTGAGACATATTGCCACTGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:846743/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:280325/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:2688942/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:2910117/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3068188/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3103523/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:2510037/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3142220/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3355767/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3760790/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:4242398/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3914139/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:4029035/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:4075559/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3658851/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:5048130/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:5138303/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:5464900/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:5665038/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:627656/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:941444/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:2396950/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:1078863/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:1199472/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:1431916/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:169030/1‑100 (MQ=255)

                             aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:1843751/1‑100 (MQ=255)

                               ggTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATattatt                                                            >  1:438867/1‑100 (MQ=255)

                                  gagaCATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGAt                                                         >  1:4355661/1‑100 (MQ=255)

                                  gagaCATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGAt                                                         >  1:678779/1‑100 (MQ=255)

                                   agaCATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATg                                                        >  1:4732053/1‑100 (MQ=255)

                                   agaCATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATg                                                        >  1:4421985/1‑100 (MQ=255)

                                   agaCATATTGCCAATGAAGTGTTAGGCTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATg                                                        >  1:2185991/1‑100 (MQ=255)

                                     gtgtatTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCt                                                      >  1:2658347/4‑100 (MQ=255)

                                        catTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTa                                                   >  1:1884895/2‑100 (MQ=255)

                                         atTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaa                                                  >  1:4828142/1‑100 (MQ=255)

                                          ttGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaa                                                 >  1:4905666/1‑100 (MQ=255)

                                          ttGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaa                                                 >  1:3791420/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAGAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:1133742/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGTGAAACGATTGATTTAGTATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:1250015/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:1174798/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:4471813/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:5619401/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:1715849/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:4973775/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:1523590/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:1591249/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:3409065/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:5276266/1‑100 (MQ=255)

                                           tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGATGTaaaa                                                >  1:211488/1‑100 (MQ=255)

                                           agCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:2263223/2‑100 (MQ=255)

                                            gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:2587185/1‑100 (MQ=255)

                                            gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:4558673/1‑100 (MQ=255)

                                            gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:717786/1‑100 (MQ=255)

                                                        ccaGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACCGgtg                                   >  1:3705574/3‑100 (MQ=255)

                                                         tAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGgtgt                                  >  1:4122288/1‑100 (MQ=255)

                                                         tAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGgtgt                                  >  1:3582363/1‑100 (MQ=255)

                                                         tAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGgtgt                                  >  1:2969862/1‑100 (MQ=255)

                                                          aGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTa                                 >  1:1798642/1‑100 (MQ=255)

                                                              tCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAtt                             >  1:3460268/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:5299945/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:4214204/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:2031015/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:3504992/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:809490/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:2313803/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:2448549/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAtcgga                          >  1:3045484/1‑96 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGCGTAGAttttt                          >  1:4651505/1‑100 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACCGGTGTAGAtcgga                          >  1:1300684/1‑96 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACCGGTGTAGAtcgga                          >  1:14840/1‑96 (MQ=255)

                                                                 gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGAAAAAGAAGCTACTGGCGTAGAttttt                          >  1:2372345/1‑100 (MQ=255)

                                                                   aaaaGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTAt                        >  1:4177774/1‑100 (MQ=255)

                                                                      tgTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAtcggaagagc                     >  1:5696595/2‑91 (MQ=255)

                                                                      aGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGaa                     >  1:2326950/1‑100 (MQ=255)

                                                                       ctacaatacaaTGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAg                    >  1:3941982/2‑100 (MQ=255)

                                                                       atacaatacaaTGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTGAAAGAAGCTACTGGTGTAGATTTTTATGAAg                    >  1:4490313/2‑100 (MQ=255)

                                                                         acaatacaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGtt                  >  1:4314648/1‑100 (MQ=255)

                                                                         acaatacaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGtt                  >  1:887766/1‑100 (MQ=255)

                                                                         acaatacaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGta                  >  1:2085233/1‑99 (MQ=255)

                                                                          caatacaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTa                 >  1:2856978/1‑100 (MQ=255)

                                                                           aatacaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTaa                >  1:1385938/1‑100 (MQ=255)

                                                                            ctacaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTaaa               >  1:5234688/2‑100 (MQ=255)

                                                                              acaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTCAAAAg             >  1:100085/1‑100 (MQ=255)

                                                                               ccctGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGt            >  1:3214188/4‑100 (MQ=255)

                                                                                gatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtg           >  1:786088/2‑100 (MQ=255)

                                                                                cctGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTTGATTTTTGTGAAGTTAAAAGtg           >  1:3308947/3‑100 (MQ=255)

                                                                                acaggggAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtg           >  1:4777534/4‑100 (MQ=255)

                                                                                   ggggAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAACAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtgatg        >  1:5549055/1‑100 (MQ=255)

                                                                                   ggggAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtgatg        >  1:5324841/1‑100 (MQ=255)

                                                                                       aaaCGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATgaaga    >  1:2760684/1‑100 (MQ=255)

                                                                                         aCGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATgaagatc  >  1:520622/1‑98 (MQ=255)

ATCATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATCGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATGAAGAAG  >  NC_007793/554987‑555175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`