D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	542,171	T→C	I293I (ATT→ATC)	SAUSA300_RS02590 →	stage V sporulation protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	542,171	0	T	C	100.0%	289.3 / NA	106	I293I (ATT→ATC)	SAUSA300_RS02590	stage V sporulation protein B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (92/14); total (92/14)

Only 100 of 106 total aligned reads displayed.

TATGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATTAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCAGGAATAGGATTAATTA  >  NC_007793/542082‑542265

tATGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaata                                                                                      >  1:856877/1‑100 (MQ=255)

ctgtaCCGTGGTGCATCATTTATTCAGACGGGATTGATTGCAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAACTGACGCAATCAAAATGaata                                                                                      >  1:2167674/5‑100 (MQ=255)

 ttGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5128269/2‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACTCAATCAAAATGaataa                                                                                     >  1:4449394/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4380941/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4949820/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5186948/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:2977671/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5336270/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5403748/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5473767/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4693211/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:2147212/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4569637/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5621911/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:3106760/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4257824/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5707840/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:1613086/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:1343350/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:3952730/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4013293/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4040241/1‑100 (MQ=255)

 aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaagat                                                                                     >  1:1520809/1‑97 (MQ=255)

 aTGACCGTGGAGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:5661863/1‑100 (MQ=255)

    gccGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCa                                                                                  >  1:4731464/2‑100 (MQ=255)

    cccGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCa                                                                                  >  1:4164276/2‑100 (MQ=255)

      cGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAgg                                                                                >  1:861325/1‑100 (MQ=255)

         ggtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTAc                                                                             <  1:3156298/100‑1 (MQ=255)

           tgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACtt                                                                           <  1:1186370/100‑1 (MQ=255)

           tgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACtt                                                                           <  1:344032/100‑1 (MQ=255)

                catTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGaa                                                                      >  1:5482847/1‑100 (MQ=255)

                    aaTTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGt                                                                  >  1:4970918/2‑100 (MQ=255)

                     tttCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGtt                                                                 >  1:197934/2‑100 (MQ=255)

                       tCAGATGGAATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTAt                                                               >  1:5545551/1‑100 (MQ=255)

                        cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:2919618/1‑100 (MQ=255)

                        cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:5296319/1‑100 (MQ=255)

                        cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:1300203/1‑100 (MQ=255)

                        cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:3947647/1‑100 (MQ=255)

                        cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAACCGTTATg                                                              >  1:4187735/1‑100 (MQ=255)

                         aGATGGGATTGATTGTAACTACACCATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGc                                                             <  1:1931212/100‑1 (MQ=255)

                         aGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGc                                                             >  1:1917249/1‑100 (MQ=255)

                         aGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGc                                                             >  1:1890302/1‑100 (MQ=255)

                            tGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCaaa                                                          >  1:4157964/1‑100 (MQ=255)

                             gggATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAAt                                                         >  1:4421718/1‑100 (MQ=255)

                                   gattgTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCa                                                   >  1:5700983/1‑100 (MQ=255)

                                       ctAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTaa                                               >  1:548582/2‑100 (MQ=255)

                                         aaCTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAg                                             >  1:1206437/1‑100 (MQ=255)

                                         aaCTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTACGCAAATGCGTCATTAAAg                                             >  1:3547131/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGAtcg                                         >  1:4355601/1‑98 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:4955186/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:690988/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:894428/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:4055197/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:2822196/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:2837746/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:1637386/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:2735729/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:2428208/1‑100 (MQ=255)

                                             acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGAAGCAATCAATATGAATAATCAGGTACTTATGAATCGTTCTGCAAATGCGTCATTAAAGATTa                                         >  1:1515/1‑100 (MQ=255)

                                             acaacaTTTAG‑TTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTAc                                        >  1:4755867/1‑100 (MQ=255)

                                                   tttAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGAttt                                   >  1:1770292/1‑100 (MQ=255)

                                                                tCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagc                      >  1:4468502/1‑100 (MQ=255)

                                                                 cATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagca                     >  1:304704/1‑100 (MQ=255)

                                                                  aTTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcag                    >  1:4501744/1‑100 (MQ=255)

                                                                  aTTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcag                    >  1:3893211/1‑100 (MQ=255)

                                                                  aTTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcag                    >  1:1101649/1‑100 (MQ=255)

                                                                   ttCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagc                   <  1:1728786/100‑1 (MQ=255)

                                                                    tccgatcttAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcg                  <  1:6082/93‑2 (MQ=255)

                                                                    tCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcg                  >  1:4209882/1‑99 (MQ=255)

                                                                     gccctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcga                 >  1:2091728/4‑98 (MQ=255)

                                                                     gatctGTTAGGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgt                 <  1:2529898/98‑3 (MQ=255)

                                                                     ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgg                 >  1:2990488/1‑98 (MQ=255)

                                                                     ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgg                 >  1:3154072/1‑98 (MQ=255)

                                                                     ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgg                 >  1:5004227/1‑98 (MQ=255)

                                                                     ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcaccgg                 >  1:4010048/1‑96 (MQ=255)

                                                                     ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGATACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgg                 >  1:2465173/1‑98 (MQ=255)

                                                                      gatctgtttgTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCggg                <  1:242068/91‑1 (MQ=255)

                                                                      ctctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCggg                >  1:2882803/1‑100 (MQ=255)

                                                                       tctcgtAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgcgc               <  1:3116421/95‑5 (MQ=255)

                                                                        ctGTTAAGTGACGCAATCAAATTGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGaa              >  1:5265239/1‑100 (MQ=255)

                                                                        ctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGaa              <  1:4579352/100‑1 (MQ=255)

                                                                          tttAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGagat            >  1:2020117/2‑97 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcgatgtaagat            >  1:4336592/1‑90 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgagatcg            >  1:4049385/1‑93 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgagatcg            >  1:5146157/1‑93 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgagatcg            >  1:2984338/1‑93 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgagatcg            >  1:2808712/1‑93 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgagatcg            >  1:2007533/1‑93 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCGGCGGGagat            >  1:626364/1‑97 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCgggtaga            >  1:2866808/1‑96 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGagat            >  1:1809798/1‑97 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGaaga            >  1:3302298/1‑98 (MQ=255)

                                                                          gTTAAGTGACGCAATCAAAATCAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAGGATTACGATTTTAATAAGTACAGCAGCGGGagat            >  1:5040177/1‑97 (MQ=255)

                                                                             caGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcagatcggaag         >  1:3089181/2‑92 (MQ=255)

                                                                               gTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGagatcggaa       >  1:4486546/1‑92 (MQ=255)

                                                                                  gcGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATACGTCATTAAAGATT‑CGATTTTAATAAGTACAGCAGCGGGAATAGGattaatt   <  1:5170259/99‑1 (MQ=255)

                                                                                  aCGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGaagatcggaaga    >  1:394659/1‑90 (MQ=255)

                                                                                   cGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGAATAGGattaatt   >  1:1426203/1‑100 (MQ=255)

                                                                                    tcAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGCTTACGATTTTAATAAGTACAGCAGCGGGAATAGGattaatta  >  1:2640092/2‑100 (MQ=255)

TATGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATTAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCAGGAATAGGATTAATTA  >  NC_007793/542082‑542265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`