| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 244,258 | T→C | intergenic (‑83/+107) | SAUSA300_RS01080 ← / ← SAUSA300_RS01085 | hypothetical protein/FMN‑dependent NADH‑azoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 244,258 | 0 | T | C | 100.0% | 34.1 / NA | 14 | intergenic (‑83/+107) | SAUSA300_RS01080/SAUSA300_RS01085 | hypothetical protein/FMN‑dependent NADH‑azoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/7); total (7/7) | |||||||||||
GCTTTCATACATTCCCACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAATATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAAGAGATACAATAAAAAACTGCATGACGTTTGAGACGTCACACAGTGT > NC_007793/244168‑244354 | gCTTTCATACATTCCCACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAAttt > 1:1402760/1‑100 (MQ=255) aCATTCCCACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTa > 1:2275394/1‑100 (MQ=255) aCATTCCCACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTa > 1:770977/1‑100 (MQ=255) ccccACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATATACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGaa > 1:4215115/2‑100 (MQ=255) gcACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGaaaa > 1:5737361/2‑100 (MQ=255) ccACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGaaaa > 1:3455987/1‑100 (MQ=255) aaCACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGaa < 1:4547287/100‑1 (MQ=255) acTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAag < 1:356570/100‑1 (MQ=255) acTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAag < 1:3833644/100‑1 (MQ=255) acTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAag < 1:4337676/100‑1 (MQ=255) cTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATTAAAAgatcggaaga > 1:3989290/1‑91 (MQ=255) aaTATTTACATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAAGAGATACAATAAAAAACTGCATg < 1:4247385/100‑1 (MQ=255) aCATCAGTATTAAAGTGAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAAGAGATACAATAAAAAACTGCATGACGTTTg < 1:774561/100‑1 (MQ=255) gAACATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAAGAGATACAATAAAAAACTGCATGACGTTTGAGACGTCACACAgtgt < 1:122406/100‑1 (MQ=255) | GCTTTCATACATTCCCACCGTTTCTCAAAATACTTCATTAACACTATAATAATATATTTTGAAAAATATTTACATCAGTATTAAAGTGAATATCAAATTTTAAATTTATGAAAATAATAGATATTTATAAAAAGCGGAAAAGAGATACAATAAAAAACTGCATGACGTTTGAGACGTCACACAGTGT > NC_007793/244168‑244354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |