| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 182,746 | T→G | L235V (TTG→GTG) | SAUSA300_RS00845 → | capsular polysaccharide biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 182,746 | 0 | T | G | 100.0% | 33.3 / NA | 14 | L235V (TTG→GTG) | SAUSA300_RS00845 | capsular polysaccharide biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (11/3); total (11/3) | |||||||||||
AATGGACAGAGGATATGAAGAGTTTATTATTGCTTCATCAGCTTTTAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAATTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGTTAGCAGAAAG > NC_007793/182649‑182837 | aaTGGACAGAGGATATGAAGAGTTTATTATTGCTTCATCAGCTTTTAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAAGTg > 1:4626559/1‑100 (MQ=255) aTGGACAGAGGATATGAAGAGTTTATTATTGCTTCATCAGCTTTTAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAAGTGa > 1:1242629/1‑100 (MQ=255) tGGACAGAGGATATGAAGAGTTTATTATTGCTTCATCAGCTTTTGAACAAAATGCTCCTTCATTCTTAATTCGAGGGTTTGGTCCGCATGAAGAAGTGAt > 1:2446229/1‑100 (MQ=255) ggACAGAGGATATGAAGAGTTTATTATTGCTTCATCAGCTTTTAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAAGTGATa > 1:5074824/1‑100 (MQ=255) ggACAGAGGATATGAAGAGTTTATTATTGCTTCATCAGCTTTTAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAAGTGATa > 1:5276580/1‑100 (MQ=255) atcaGCTTTTAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAAGTGATAAAAGAACTGATTAGTTATAACCCGGAAAATAtt < 1:551940/100‑1 (MQ=255) tttAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAAGTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTgg < 1:2204526/100‑1 (MQ=255) ttGGTCCGCATGAAGAAGTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGtt > 1:4580455/1‑100 (MQ=255) ctGGTCCGCATGAAGAAGTGGTAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGtt < 1:1943102/99‑1 (MQ=255) agccGCATGAAGAAGTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGTCAGc > 1:3236416/3‑100 (MQ=255) tCCGCATGAAGAAGTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGTTAGCa > 1:2396579/1‑100 (MQ=255) ccGCATGAAGAAGTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGTTAGCAg > 1:1723241/1‑100 (MQ=255) gCATGAAGAAGTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGTTAGCAGaa > 1:5667055/1‑100 (MQ=255) ctGAAGAAGTGATAAAAGAACTGATTAGGTATAACCAGGAAAATATTAGGTTGGATAAAACAGTTGAAGTAAAAGAATTGGATGATAAGTTagaagatcg > 1:2257872/2‑97 (MQ=255) | AATGGACAGAGGATATGAAGAGTTTATTATTGCTTCATCAGCTTTTAAACAAAATGCTCCTTCATTCATAATTCGAGGGTTTGGTCCGCATGAAGAATTGATAAAAGAACTGATTAGTTATAACCCGGAAAATATTAGGTTGGATAAACCAGTTGAAGTAAAAGAATTGGTTGATAAGTTAGCAGAAAG > NC_007793/182649‑182837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |