Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	97,913	G→A	D165D (GAC→GAT)	SAUSA300_RS00460 ←	tRNA‑dihydrouridine synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	97,913	0	G	A	100.0%	286.4 / NA	97	D165D (GAC→GAT)	SAUSA300_RS00460	tRNA‑dihydrouridine synthase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (3/94);  total (3/94)

AAATTTTTAATAGCTTCGATTAATTCCCAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATGTCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCTTTA  >  NC_007793/97824‑98009                                                                                          |                                                                                                 aaaTTTTTAATAGCTTCGATTAATTCCCAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGa                                                                                        >  1:58554/1‑100 (MQ=255)  aaTTTTTAATAGCTTCGATTAATTCCCAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCggt                                                                                       <  1:3544275/100‑3 (MQ=255)           tAGCTTCGATTAATTCCCAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCtt                                                                              <  1:3221769/100‑1 (MQ=255)                  gATTAATTCCCAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCaa                                                                       <  1:4273046/100‑1 (MQ=255)                      ttttCCCAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCtt                                                                   <  1:3323980/98‑1 (MQ=255)                           ccAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCAt                                                              <  1:5112228/100‑1 (MQ=255)                            ctcttccgaTCTGCTTTGCTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCAtg                                                             <  1:274330/92‑2 (MQ=255)                            cAATGTGCATCTACTTTATTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCAtt                                                             <  1:3889350/100‑1 (MQ=255)                            cAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCAtt                                                             <  1:3967676/100‑1 (MQ=255)                              aTGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCa                                                           <  1:3226117/100‑1 (MQ=255)                                gtgCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCagc                                                         <  1:1092099/100‑3 (MQ=255)                                      cTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTc                                                   <  1:2514944/100‑1 (MQ=255)                                         acttACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCAta                                                >  1:234355/3‑100 (MQ=255)                                           ttACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCAtagt                                              <  1:5237423/100‑1 (MQ=255)                                               tCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGcc                                          <  1:2164099/100‑1 (MQ=255)                                               tCATTTCTTTACGTGTACGAAGATGAATAGATAAATGGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGcc                                          <  1:4982747/100‑1 (MQ=255)                                               tCATTTCTTTACGTGTACGAAGAGGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCATCCAATCTTTCCATTCATCGATTTCATAGTAGcc                                          <  1:5587341/100‑1 (MQ=255)                                                cATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGccc                                         >  1:3464421/1‑99 (MQ=255)                                                cATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCa                                         <  1:1695047/100‑1 (MQ=255)                                                cATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCa                                         <  1:3203121/100‑1 (MQ=255)                                                cATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCa                                         <  1:3942727/100‑1 (MQ=255)                                                cATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCa                                         <  1:4695156/100‑1 (MQ=255)                                                cATCTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCa                                         <  1:1825359/100‑1 (MQ=255)                                                 aTTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCaa                                        <  1:2143209/100‑1 (MQ=255)                                                 aTTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCaa                                        <  1:2481436/100‑1 (MQ=255)                                                   ttCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAgg                                      <  1:4288368/100‑1 (MQ=255)                                                   ttCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAgg                                      <  1:1319907/100‑1 (MQ=255)                                                   ttCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACATGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAgg                                      <  1:1776825/100‑1 (MQ=255)                                                       ttACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtg                                  <  1:5455540/100‑1 (MQ=255)                                                       ttACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtg                                  <  1:3020114/100‑1 (MQ=255)                                                       ttACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtg                                  <  1:3343934/100‑1 (MQ=255)                                                        tACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtgt                                 <  1:3921376/100‑1 (MQ=255)                                                        tACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtgt                                 <  1:4574889/100‑1 (MQ=255)                                                        tACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtgt                                 <  1:4905589/100‑1 (MQ=255)                                                        tACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtga                                 <  1:5297738/100‑2 (MQ=255)                                                        tACGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgggt                                 <  1:4941856/100‑1 (MQ=255)                                                         aCGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtgta                                <  1:1083248/100‑2 (MQ=255)                                                         aCGTGTACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGtt                                <  1:634585/100‑1 (MQ=255)                                                           gtgtACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGtttt                              <  1:1918057/100‑1 (MQ=255)                                                             gtACGAAGATGAATAGATAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTat                            <  1:3190050/100‑2 (MQ=255)                                                              tACGAAGATGAATAGATAAATTGGCAATATCGTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCgtcggggctg                           <  1:5399349/100‑9 (MQ=255)                                                                             aTAAATTGGCGATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGcct            <  1:5460657/100‑2 (MQ=255)                                                                             aTAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGcct            <  1:1107317/100‑2 (MQ=255)                                                                              tAAATTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCa           <  1:4501030/100‑1 (MQ=255)                                                                                 aTTGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCAcag        <  1:720514/100‑3 (MQ=255)                                                                                  ttGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTg       <  1:875459/100‑1 (MQ=255)                                                                                  ttGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTg       <  1:4125686/100‑1 (MQ=255)                                                                                  ttGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTg       <  1:4358026/100‑1 (MQ=255)                                                                                  ttGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTg       <  1:3595355/100‑1 (MQ=255)                                                                                  ttGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTg       <  1:5464258/100‑1 (MQ=255)                                                                                  ttGGCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTGCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCAccac       <  1:5011717/100‑3 (MQ=255)                                                                                    ggCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTggg     <  1:50292/100‑3 (MQ=255)                                                                                    ggCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGcg     <  1:3067986/100‑2 (MQ=255)                                                                                    ggCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGca     <  1:2597615/100‑2 (MQ=255)                                                                                    ggCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCt     <  1:1098847/100‑1 (MQ=255)                                                                                    ggCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCt     <  1:1526916/100‑1 (MQ=255)                                                                                    ggCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCt     <  1:4019573/100‑1 (MQ=255)                                                                                    ggCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCt     <  1:736339/100‑1 (MQ=255)                                                                                     gCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCGCCTgggt    <  1:2523540/100‑4 (MQ=255)                                                                                     gCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGcat    <  1:451520/100‑3 (MQ=255)                                                                                     gCAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGcag    <  1:5060803/100‑3 (MQ=255)                                                                                      cAATATCTTGTTCGAAGGCGTGCTTCAACCAATCTTTCCATTCATCGGTTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:116758/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTTATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3846319/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGTCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:2888400/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACGCTTACCGGAAGCCCACCTGCttt   <  1:185525/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCtcatca   <  1:1975676/100‑6 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTgagag   <  1:1200715/100‑5 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGccac   <  1:5119469/100‑4 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:98899/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:774392/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:5759280/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:90815/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:5412229/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:5155454/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:750587/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3123517/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:1101766/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:1108091/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:224881/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:2275850/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:2451220/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:2563832/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:2710713/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:2794061/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:4665074/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3292708/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3598461/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3715472/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3792527/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3796943/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:3881677/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttt   <  1:434742/100‑1 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCttg   <  1:1252217/100‑2 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCtta   <  1:5531726/100‑2 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCtta   <  1:4005331/100‑2 (MQ=255)                                                                                      cAATATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCtta   <  1:2198901/100‑2 (MQ=255)                                                                                       aaTATCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGccaca  <  1:5149816/100‑5 (MQ=255)                                                                                          |                                                                                                 AAATTTTTAATAGCTTCGATTAATTCCCAATGTGCATCTACTTTACTCATTTCTTTACGTGTACGAAGATGAATAGATAAATTGGCAATGTCTTGTTCGAAGACGTGCTTCAACCAATCTTTCCATTCATCGATTTCATAGTAGCCAAGGCGTGTTTTAACACTTACCGGAAGCCCACCTGCTTTA  >  NC_007793/97824‑98009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑