Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 62,578 G→A A4V (GCT→GTT)  SAUSA300_RS00270 ← transposase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00779362,5780GA100.0% 14.6 / NA 7A4V (GCT→GTT) SAUSA300_RS00270transposase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (2/5);  total (2/5)

TGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAGCTCTTTTCATAGAAAAAAACACCTCCGTATGATTCATTTTAATATGAATTCAACGAAAGTGTTTTTATATAATTCCCACT‑ATTGGGGTC  >  NC_007793/62517‑62667
                                                             |                                                                                          
ttttgAAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGTATGATTCAtt                                                      >  1:4436596/3‑100 (MQ=255)
                            aCTGCTTTATACTTTGTTTCTACTGAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGTATGATTCATTTTAATATGAATTCAACGAAAATGttttt                          >  1:1642627/1‑100 (MQ=255)
                                       cTTTGTTTCTACTGAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGTATGATTCATTTTAATATGAATTCAACGAAAATGTTTTTATATAATTccc               <  1:4722789/100‑1 (MQ=255)
                                          tGTTTCTACTGAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGTATGATTCATTTTAATATGAATTCAACGAAAATGTTTTTATATAATTCCCACt            <  1:320370/100‑1 (MQ=255)
                                                    gAATAAGAAACTCTTTTCATAGAAAAAAACGCCTCCGTATGATTCATTTTAATATGAATTCAACGAAAATGTTTTTATATAATTCCCACTAACTGGGGTc  <  1:3156216/100‑1 (MQ=255)
                                                    gAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGTATGATTCATTTTAATATGAATTCAACGAAAATGTTTTTATATAATTCCCACTAATTGGGGTc  <  1:1391135/100‑1 (MQ=255)
                                                    gAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGTATGATTCATTTTAATATGAATTCAACGAAAATGTTTTTATATAATTCCCACTAATTGGGGTc  <  1:3995734/100‑1 (MQ=255)
                                                             |                                                                                          
TGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAGCTCTTTTCATAGAAAAAAACACCTCCGTATGATTCATTTTAATATGAATTCAACGAAAGTGTTTTTATATAATTCCCACT‑ATTGGGGTC  >  NC_007793/62517‑62667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑