D66 :: BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,225,505	1	.	G	73.6%	250.3 / 134.6	140	coding (1566/1647 nt)	SAUSA300_RS06055	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (33/4); new base G (102/1); total (135/5)
Fisher's exact test for biased strand distribution p-value = 1.74e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.29e-01

Only 100 of 151 total aligned reads displayed.

TGTTAAATGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGATGTAGAAGTGGAAGTTCATGAAGGTGGACAACCAATTTATCA  >  NC_007793/1225408‑1225564

tgttAAATGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAGAC‑T‑GAGATC‑g                                                             >  1:1446441/1‑100 (MQ=255)

 tgtgtgtGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGACGCAGAGCAAGCAGTTACAGATAACATGATAACC‑T‑GAGATC‑gg                                                            >  1:2220154/7‑99 (MQ=255)

   tAAATGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAGC‑C‑A‑GATC‑ggaag                                                         >  1:18632/1‑96 (MQ=255)

   tAAATGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGAT‑AAC‑T‑A‑GATC‑ggaaga                                                        >  1:2807398/1‑95 (MQ=255)

   atcaTGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATCAAC‑C‑A‑GATC‑ggaag                                                         >  1:5203061/4‑96 (MQ=255)

    aactGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAACC‑T‑GAGATC‑ggaag                                                         >  1:1044996/4‑96 (MQ=255)

    aaaTGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑C‑A‑GATC‑ggaaga                                                        >  1:5159476/1‑95 (MQ=255)

    aaaTGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAC‑A‑A‑GATC‑ggaaga                                                        >  1:4651039/1‑95 (MQ=255)

    aaaTGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTAGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑Aagag                                                       >  1:4865436/1‑100 (MQ=255)

      ctGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAGC‑T‑A‑GATCGG‑AAGAGc                                                      >  1:4105343/2‑100 (MQ=255)

      ctGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑GAGATCGG‑Aagag                                                       >  1:238513/2‑100 (MQ=255)

       tGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATTAAC‑T‑A‑GATCGG‑AAGAGCa                                                     >  1:1421616/1‑100 (MQ=255)

       tGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑GAGATCGG‑AAGAGc                                                      >  1:546660/1‑100 (MQ=255)

       tGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCa                                                     >  1:390229/1‑100 (MQ=255)

        gagaTGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATACAC‑T‑A‑GATCGG‑AAGAGCac                                                    >  1:5397320/1‑99 (MQ=255)

        gagaTGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAGC‑TAA‑GATCGG‑AAGAGCa                                                     >  1:3568837/1‑100 (MQ=255)

        gagaTGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAGC‑T‑GAGATCGG‑AAGAGCa                                                     >  1:3722654/1‑100 (MQ=255)

        gagaTGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑GAGATCGG‑AAGAGCa                                                     >  1:4757533/1‑100 (MQ=255)

        gagaTGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCac                                                    >  1:5430196/1‑99 (MQ=255)

        gagaTGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCac                                                    >  1:756633/1‑99 (MQ=255)

        cagaTGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAC‑T‑A‑GATCGG‑AAGAGCac                                                    >  1:1658816/2‑99 (MQ=255)

            tcttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAACC‑T‑A‑GATCGG‑AAGAGCacacgt                                                >  1:803219/3‑95 (MQ=255)

            tGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATGAAC‑T‑A‑GATCGG‑AAGAGCacacgt                                                >  1:168081/1‑95 (MQ=255)

            tGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTCACAGATAACATGATAAAC‑T‑GAGATCGG‑AAGAGCacacg                                                 >  1:3659016/1‑96 (MQ=255)

             tttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAGACAT‑A‑GATCGG‑AAGAGCacacgt                                                >  1:2393480/2‑95 (MQ=255)

             tttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCa                                              >  1:3392870/2‑100 (MQ=255)

             gctAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCa                                              >  1:5031045/3‑100 (MQ=255)

             gTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATTAAC‑G‑A‑GATCGG‑Aagagtacacgtc                                               >  1:5310512/1‑92 (MQ=255)

             gTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAATC‑T‑A‑GATCGG‑AAGAGCacacgtc                                               >  1:5469760/1‑94 (MQ=255)

             gTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAACAT‑A‑GATCGG‑AAGAGCacacgt                                                >  1:2165638/1‑95 (MQ=255)

             gTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCacacgtc                                               >  1:5224038/1‑94 (MQ=255)

             cttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGGGCAAGCAGTTACAGATAACATGATAAAT‑A‑A‑GATCGG‑AAGAGCacacgtc                                               >  1:3113320/2‑94 (MQ=255)

             cttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAC‑C‑A‑GATCGG‑AAGAGCacacgtc                                               >  1:4399494/2‑94 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACTGATAACATGATGAAC‑T‑A‑GATCGG‑AAGAGCacacgtct                                              >  1:3118173/1‑93 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATTAAC‑C‑A‑GATCGG‑AAGAGCacacgtct                                              >  1:3083174/1‑93 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATATAC‑T‑GAGATCGG‑AAGAGCacacgtc                                               >  1:1263008/1‑94 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAGC‑A‑A‑GATCGG‑AAGAGCacacgtct                                              >  1:278018/1‑93 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAg                                             >  1:3333549/1‑100 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAg                                             >  1:772493/1‑100 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAg                                             >  1:1303411/1‑100 (MQ=255)

              ttAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCacacgtct                                              >  1:2100332/1‑93 (MQ=255)

              gtAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAG‑T‑GAGATCGG‑AAGAGCacacgtc                                               >  1:4490119/2‑94 (MQ=255)

              ctAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAg                                             >  1:293623/2‑100 (MQ=255)

              atAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATccgg                                             >  1:3323791/2‑98 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGGT‑AAC‑T‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:1830620/1‑91 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATGAAC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:846171/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATCAAC‑G‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:5643457/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATATAC‑T‑GAGATCGG‑AAGAGCacacgtct                                              >  1:419403/1‑93 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATATAC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:3138617/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAGAC‑C‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:2320321/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATACGC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:410272/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATACGC‑C‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:2447773/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAATC‑C‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:2153258/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAACT‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:2182609/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAACC‑T‑GAGATCGG‑AAGAGCacacgtct                                              >  1:4199151/1‑93 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAACC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:4222850/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAACA‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:1972986/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑GAGATCGG‑AAGAGCacacgtct                                              >  1:1547264/1‑93 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCTGa                                            >  1:2194360/1‑100 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCacacgtcta                                             >  1:5001406/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑G‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:4633337/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑G‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:1378633/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑A‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:2448621/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAA‑A‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:4206695/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGAT‑ACC‑T‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:4855999/1‑91 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGAT‑AAC‑T‑GAGATCGG‑AAGAGCacacgtctg                                             >  1:280593/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGAT‑AAC‑T‑A‑GATCGG‑AAGAGCacacgtgaac                                            >  1:2981060/1‑91 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGAT‑AAC‑T‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:1181654/1‑91 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGAGAAAC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:1559327/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACGAAC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:3209372/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACGAAC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:46720/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:4527700/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAC‑C‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:5249362/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAA‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:5648563/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGCGATTATTGGTCCAGATGTAGAGTAAGCAGTTACAGATAATATGATGAAC‑C‑A‑GATT‑GCAAGAGCacacgtctg                                             >  1:2859524/1‑92 (MQ=255)

               tAGCAGAAGATAGTGAAATATTGACTGCGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑A‑GAGATCGG‑AAGAGCacacgtct                                              >  1:247682/1‑93 (MQ=255)

               caGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATACAC‑T‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:353899/2‑92 (MQ=255)

                cgCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑C‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:3022906/2‑91 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGGTAAA‑‑T‑A‑GATCGG‑AAGAGCacacgtctgaa                                           >  1:3971446/1‑90 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATGAACAT‑A‑GATCGG‑AAGAGCacacgtctg                                             >  1:867956/1‑92 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATGAAC‑A‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:2604299/1‑91 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAGC‑A‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:3744046/1‑91 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑TAA‑GATCGG‑AAGAGCacacgtctg                                             >  1:1927528/1‑92 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGAt                                           >  1:3033798/1‑100 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGAt                                           >  1:1041401/1‑100 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGAt                                           >  1:692797/1‑100 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGAt                                           >  1:1767803/1‑100 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGAt                                           >  1:439898/1‑100 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGAt                                           >  1:1924248/1‑100 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:608080/1‑91 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑C‑A‑GATCGG‑AAGAGCacacgtctga                                            >  1:1731862/1‑91 (MQ=255)

                aGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑A‑GAGATCGG‑AAGAGCacacgtctg                                             >  1:3634444/1‑92 (MQ=255)

                 tcAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGacg                                          >  1:5165376/2‑98 (MQ=255)

                 gCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑A‑GATCGG‑AAGAGCacacgtctgaa                                           >  1:1711847/1‑90 (MQ=255)

                 gCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAC‑T‑A‑GATCGG‑AAGAGCacaccctgtaa                                           <  1:1316620/100‑11 (MQ=255)

                 gCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGACAAAC‑A‑A‑GATCGG‑AAGAGCacacgtctgaa                                           >  1:2687193/1‑90 (MQ=255)

                 gCAGAAGATAGTGAAATATTGACTGTGATTACTGGTCAAGATGCAGAGCAAGCAGCTACAGATAACATGATAAAC‑TAA‑GATCGG‑AAGAGCacacgtctga                                            >  1:2009200/1‑91 (MQ=255)

                           gTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGATGTAGAAGTGGa                                <  1:1654393/100‑1 (MQ=255)

                                     gACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGATGTAGAAGTGGAAGTTCATGaa                      >  1:2195411/1‑100 (MQ=255)

                                                         aTGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCATTATCCAGATGTAGAAGTGGAAGTTCATGAAGGTGGACAACCAATTTATCa  >  1:13486/1‑100 (MQ=255)

TGTTAAATGAGATGTTAGCAGAAGATAGTGAAATATTGACTGTGATTATTGGTCAAGATGCAGAGCAAGCAGTTACAGATAACATGATAAAC‑T‑G‑GATC‑G‑AAGAGCAATATCCAGATGTAGAAGTGGAAGTTCATGAAGGTGGACAACCAATTTATCA  >  NC_007793/1225408‑1225564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`