Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007793320,3170CA71.5% 61.0 / 65.9 121A159S (GCC→TCC) SAUSA300_RS01440quinolone resistance protein NorB
Reads supporting (aligned to +/- strand):  ref base C (4/29);  new base A (0/83);  total (4/117)
Fisher's exact test for biased strand distribution p-value = 5.71e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.23e-04

Only 100 of 122 total aligned reads displayed.

GTTGACTTACTTTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTTCTCCTTTAA  >  NC_007793/320218‑320409
                                                                                                           |                                                                                               
 ttGACTTACTTTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑a                                                                                               <  1:3766194/100‑1 (MQ=255)
 ttGACTTACTTTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑a                                                                                               <  1:1122066/100‑1 (MQ=255)
 ttGACTTACTTTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑a                                                                                               <  1:2960660/100‑1 (MQ=255)
 ttGACTTACTTTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑a                                                                                               <  1:3977930/100‑1 (MQ=255)
    acttgcttTTTCAGGAGTGCCTTTTAGAACAAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑tt                                                                                           <  1:3334209/100‑1 (MQ=255)
    acttacttTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑tt                                                                                           <  1:2254872/100‑1 (MQ=255)
    acttacttTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑tt                                                                                           <  1:1886579/100‑1 (MQ=255)
    acttacttTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑tt                                                                                           <  1:1386073/100‑1 (MQ=255)
      ttacttTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑aacccc                                                                                          <  1:1959385/100‑5 (MQ=255)
          attttCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑TTAAA‑ccg                                                                                    >  1:4721225/2‑100 (MQ=255)
                         tttaaaaaaaaaTAGGGAAATAAAAGAAATGACTATAATAATGA‑GAAATTGCTTTTGCCACC‑GAAA‑A‑TT‑T‑GG‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCt                                                                     <  1:4255284/90‑1 (MQ=255)
                         tttaaaaaGCAATAGGGAAAAAAAAGCAATGATTATACAAAGAAGAAAATT‑CGTTTACCACC‑CAAA‑T‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCTGCt                                                                     <  1:576376/94‑1 (MQ=255)
                         tttaAGAAGAAATATGGAAATAAAAGAAATGACTATAATAATGATGAAATT‑CTTTTGCCATC‑CGAA‑T‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCt                                                                     <  1:3091227/100‑1 (MQ=255)
                         tttaAGAAAAAATAGGGAAAGAAAAGCAAAGACGTGAGTAATGAAGAATTG‑CTTTTGCCTGC‑CGAA‑T‑TT‑G‑GA‑GA‑T‑AA‑TAAAC‑CCGCCGATAACACCAGCt                                                                     <  1:2519803/100‑1 (MQ=255)
                         cccgatctaaaaTATGGAAATGAAAGAAATGACTATACTAATGATAAATTT‑CGTTTGCCACC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCt                                                                     <  1:466542/90‑1 (MQ=255)
                          ttaaaaaGAAATATGAAAATAAAAGAAATGATAATACTAAGGATAAATTT‑CGTTGCCCACC‑CAAA‑A‑TT‑T‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTa                                                                    <  1:5017132/95‑1 (MQ=255)
                           tgagaagaAATAGGGAAAAGAAAGAAATAACTATATTAATGAGAATATT‑CTTTTGCCA‑C‑CCAA‑A‑TT‑T‑GG‑GG‑A‑AATTTAAA‑CCGCCGATAACACCAGCTAg                                                                   <  1:2029199/98‑1 (MQ=255)
                           taagaagaAATATGGAAATGAAAGCAATGACTATACAAAGGATAAAATT‑CGTTTGCCACC‑CGAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAg                                                                   <  1:3375800/98‑1 (MQ=255)
                           taagaagaAATATGGAAATGAAAGAAATGATTATATTAATGATGAATTT‑CTTTTCCCACC‑AAAA‑T‑TT‑T‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAg                                                                   <  1:1364315/98‑1 (MQ=255)
                           taagaagaAATAGGGAAAGAAAAGAAATGACTATACTAATGATGAAATT‑CGTTGGCCACC‑AAAA‑A‑TT‑G‑GG‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTaa                                                                   <  1:844939/98‑2 (MQ=255)
                            aagaagaAATATGACAAGAAAAACAATGACTATAATAATAATAAAATT‑CTTTTACCACC‑AGAA‑T‑TT‑G‑GA‑GA‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAgg                                                                  <  1:462622/99‑1 (MQ=255)
                            aagaagaAATAGGGAAAAAAAAGCAATAAATATAAAAAGAATGAAATC‑CTTTGGCCACC‑CAAA‑T‑TT‑T‑GG‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAgt                                                                  <  1:241238/99‑2 (MQ=255)
                             tcccgattaatGGCAATAAAAGCAATGTCTATACTAATGATAAAGTT‑CTTTTGCCCCC‑CAAA‑T‑TT‑A‑GG‑GC‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGc                                                                 <  1:406071/91‑1 (MQ=255)
                             agaagaAATAGGGAAATGAAAGAAATGATTATACAAAGGATGAATTT‑GTTTTGCCA‑C‑CCAA‑A‑TT‑T‑GG‑GG‑G‑AATTTAAA‑CCGCCGATAACACCAGCTAGGc                                                                 <  1:4452507/100‑1 (MQ=255)
                             agaagaAATAGGGAAAAAAAAGAAATGACTATACTAATGATGAAATT‑CGTTTGCCACC‑CAAA‑A‑TG‑G‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAggg                                                                 <  1:254672/100‑2 (MQ=255)
                             aaaaaaaaTGTGGAATTGAAAGAAATCATTATACTATTGAT‑AATTT‑TCTTTGCCCCCACGAA‑T‑TT‑G‑GA‑GG‑A‑AT‑TTAAT‑CCGCCGATAACACCAGCTAGGc                                                                 <  1:5396572/94‑1 (MQ=255)
                             aaaaGAAATAGGGAAAGAAAAGAAATGACTATAAAAAAGAGAAATTT‑CTTTTCCCACC‑AAAA‑T‑TT‑T‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGc                                                                 <  1:3231220/98‑1 (MQ=255)
                             aGAAGCAATATGGAAAAGAAAGCAATAACTAAAATAAGGAAAAATTT‑TGTTTGCCATC‑CAAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAgca                                                                 <  1:4510860/100‑3 (MQ=255)
                              gaagaaATAGGGAAATGAAAGAAATGACTATACTAATGATGAAGTT‑CGTTGGCCACC‑AGAA‑A‑GT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGcc                                                                <  1:235956/100‑1 (MQ=255)
                              gAAGCAATATGAAAATAAAAGAAATGATAATATTAATGATAAATTT‑CTTTTCCCACC‑CAAA‑T‑TT‑T‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGcc                                                                <  1:771366/100‑1 (MQ=255)
                               aaaaaaTATGGAAATGAAAGAAAGGATTATAATAATAATGAAATT‑GTTTGGCCATC‑CGAA‑G‑TT‑T‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGTCCg                                                               <  1:5233407/96‑1 (MQ=255)
                               aaGAAATATGGAAGGAAAAACAATGACTATATAAATGATAAAAGT‑CTTTGGCCCCC‑CAAA‑A‑TT‑T‑AA‑GG‑C‑AT‑TTAAG‑CCGCCGATAACACCAGCTAGGCCg                                                               <  1:719686/100‑1 (MQ=255)
                               aaGAAATATGGAAATAAAAGCAATGACTATACTAAGGAAAAAATT‑CGTTGGCCACC‑AGAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCg                                                               <  1:469646/100‑1 (MQ=255)
                               aaGAAATAGGGCAAAAAAACCAGTGTCTATATTAATGAGAAAATT‑TTTTTCCCACC‑CAAA‑T‑TT‑T‑GA‑GA‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCg                                                               <  1:5794280/100‑1 (MQ=255)
                               aaGAAATAGGGAAAAAAAAGAAATGATTATACTAATGAAAAATTT‑CGTTTCCCACC‑AAAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGcct                                                               <  1:5657559/100‑2 (MQ=255)
                                agaaaTAGGGAAATAAAAGAAATGACTATACAAATGATAAAATT‑CGTTTCCCACC‑CAAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGa                                                              <  1:1843613/97‑1 (MQ=255)
                                    atatGGCAATAAAAGCAATGACTATACTAATAAAGAATTT‑CTTTTCCCCCC‑CAAA‑T‑TT‑T‑GA‑GC‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGcc                                                          <  1:3584172/100‑1 (MQ=255)
                                    atagGGAAATAAAAGAAATGACTATACAAATGATGAATTT‑CGTTTCCCACC‑AAAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TAAAC‑CCGCCGATAACACCAGCTAGGCCGATGca                                                          <  1:3899013/100‑2 (MQ=255)
                                     tagggCAATAAAAAAAATGAATATAATAATAAGAAATTT‑CGTTTCCCTTC‑AGAA‑T‑TT‑T‑GG‑GG‑A‑AA‑TAAAC‑CCGCCGATAACACCAGCTAGGCCGATGcca                                                         <  1:1193640/97‑1 (MQ=255)
                                     atgggCAAGAAAAGCAATAATTAACATAAGGAAAAATTT‑CTTTTCCCCCC‑CAAA‑A‑TT‑G‑GA‑GG‑C‑AT‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGcca                                                         <  1:4996503/97‑1 (MQ=255)
                                      gtgtcAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGccac                                                        >  1:3869042/5‑100 (MQ=255)
                                       tGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCCAGGccagatcggaa                                                       >  1:2133541/1‑91 (MQ=255)
                                         gaaaaaaaaGCAAAGACAATACAAAATAAGAATTG‑CTTTTGCCA‑C‑CAAA‑A‑TTGG‑GA‑GT‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCaa                                                     <  1:1837739/94‑1 (MQ=255)
                                          aaaTGAAAGCAATGACTATACAAAGGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑G‑GG‑GG‑C‑AA‑TAAAG‑CCGCCGGTAACACCAGCTAGGCCGATGCCACCAAc                                                    <  1:4915477/99‑1 (MQ=255)
                                          aaaTAAAAGAAATGACTATACAAATGATAAATTT‑CTTTTCCCCCC‑GAAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAAc                                                    <  1:2763683/99‑1 (MQ=255)
                                           aagaaaaGAAATGACTATAAAAATAATAAATTT‑CTTTTCCCA‑C‑CCAA‑A‑TT‑T‑GG‑GG‑CAAA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGccaccacat                                                   <  1:5057179/96‑4 (MQ=255)
                                             taaaaaaaaTGACTATACAAAGAAAAAATTT‑CTTTTCCCATC‑CAAA‑A‑TT‑T‑GA‑GA‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGt                                                 <  1:3717032/93‑1 (MQ=255)
                                             tGAAAGAAAGGACTATACTAATGATAAATTT‑CGTTTCCCA‑C‑CAAA‑A‑TT‑TGGA‑GA‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGt                                                 <  1:1195795/100‑1 (MQ=255)
                                             tGAAAACAATAATTATATTAAGAATAAATTT‑TGTTTCCCATC‑ATAA‑T‑TG‑T‑GA‑GC‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGt                                                 <  1:5016197/100‑1 (MQ=255)
                                             gaaaaGCAAAAATTTTAATAATTATAAAATT‑TTTTTGCAATC‑TAAA‑T‑TT‑G‑GA‑GG‑C‑AT‑TTAAG‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACaat                                                 <  1:4561440/98‑3 (MQ=255)
                                             gaaaaGAAATGACTATACTAAGGATAAAATT‑CGTTGGCCACC‑CGAA‑A‑TT‑G‑GA‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGt                                                 <  1:5027527/98‑1 (MQ=255)
                                             attctgaaaTGATAATACTAAGGAGAAATTT‑CTTTTGCCA‑C‑CGAATA‑TT‑G‑GG‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGt                                                 <  1:4062943/93‑1 (MQ=255)
                                             aaaaaGAAATGACTATACAAAGGAGAAATTT‑CTTTTGCCACC‑GGAA‑A‑TT‑T‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGt                                                 <  1:438587/98‑1 (MQ=255)
                                              gaaagaaaTGACTATACAAATGATGAAATT‑CGTTGGCCACC‑AGAA‑A‑TT‑G‑GG‑GA‑A‑AA‑TTATA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTa                                                <  1:3958280/100‑1 (MQ=255)
                                                aaccAATGATTATACAAATGATAAATTT‑CTTTTCCCGCC‑CAAA‑T‑TT‑G‑GG‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:1948323/97‑1 (MQ=255)
                                                aaccAATGACTATACTAATAATAAATTT‑CGTTTCCCA‑C‑CAAA‑A‑TT‑TGGA‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:3247178/97‑1 (MQ=255)
                                                aacaaaTGAATATACCAAAGAAAAAATT‑AGTTAGCAAAC‑CAAA‑T‑TG‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:38399/96‑1 (MQ=255)
                                                aaacAAAGATTATACTAATGATAAAATG‑C‑TTTGCCCAC‑CGAA‑A‑TT‑TGGA‑GT‑A‑AA‑TTAAG‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:3190287/97‑1 (MQ=255)
                                                aaGGAATGACTATA‑TAAGGAAGAAACT‑TGTTTGCCCAC‑CCAA‑A‑GT‑T‑GG‑GG‑G‑AA‑TTAAAGCCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:3646166/100‑1 (MQ=255)
                                                aaGCAATGACTATACAAAGGATGAAATT‑TGTTTGCCA‑C‑CAAA‑A‑TT‑TGGA‑GG‑C‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:4900699/100‑1 (MQ=255)
                                                aaGCAATAACTATACAAAGGAAGAAATT‑CTTTCCCCACC‑CAAA‑A‑TT‑G‑GG‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:2285308/100‑1 (MQ=255)
                                                aaGAAATTATTATACAAATGAAAAAATT‑CTTTTCCCACC‑AAAA‑A‑TT‑T‑GA‑GG‑C‑AT‑TTAAC‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:678857/100‑1 (MQ=255)
                                                aaGAAATGAATATAATAAGAATAAATTT‑CTTTTGCCACC‑GGAA‑A‑TT‑A‑GA‑GA‑A‑AA‑TTAAG‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:4886537/100‑1 (MQ=255)
                                                aaGAAAGGACTATACTAATGATGAATTT‑CGTTGCCCACC‑AGAA‑A‑TG‑G‑GG‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACt                                              <  1:257961/100‑1 (MQ=255)
                                                 agaattGACTATAAAAGTGAAAAATTT‑CGTTCGCCTCC‑AGAA‑A‑TT‑G‑GA‑GG‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTa                                             <  1:1836509/95‑1 (MQ=255)
                                                 agaatggattataCAAAGGATAAAATT‑GTTTTGCCACC‑AGAA‑G‑TG‑G‑GA‑GG‑A‑AT‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTa                                             <  1:5039927/91‑1 (MQ=255)
                                                 agaaatcattataTTAAAGAAGAAATT‑CGTTTCCCACC‑CAAA‑A‑TG‑G‑GG‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTa                                             <  1:4264733/91‑1 (MQ=255)
                                                 agaaataaatataCAAAGGAGAAAATT‑CTTTTGCCATC‑AGAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTa                                             <  1:1379040/91‑1 (MQ=255)
                                                 aGCAATGACTATACTAAGGATAAATTT‑CGTTTGCCACC‑AAAA‑A‑TT‑T‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTa                                             <  1:5025430/100‑1 (MQ=255)
                                                 aGCAATAACTATACGAAAAATGAAATT‑CGTGCGCCAAC‑AGAA‑A‑TT‑G‑GG‑GA‑C‑AA‑TTAAC‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTa                                             <  1:3968837/100‑1 (MQ=255)
                                                  gaaaTGACTATAAAAATGAGAAAATT‑CTTTTGCCATC‑GAAA‑T‑TT‑T‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTag                                            <  1:4925256/98‑2 (MQ=255)
                                                  gaaaTGACTATAAAAATGA‑AAAATT‑TCTTTGCCCAT‑CAAA‑A‑TT‑T‑GG‑GGAA‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTat                                            <  1:538366/98‑2 (MQ=255)
                                                  ccaagtaCTATACAAATGAGAAAATT‑CTTTTGCCTCC‑CAAA‑T‑TT‑T‑GA‑GC‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTaa                                            <  1:4120724/94‑1 (MQ=255)
                                                       ttttataATATTGATAAATTT‑CTTTCCCCATC‑AAAT‑T‑TT‑T‑GA‑GG‑A‑TG‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:4489882/97‑1 (MQ=255)
                                                       gattataCTAATGATAAATTT‑GGTTTCCCCCC‑AAAA‑A‑TT‑G‑GA‑GC‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:2669293/97‑1 (MQ=255)
                                                       gataataCAAATGAGTAATTT‑TTTTTGCCA‑C‑CAGA‑A‑TT‑T‑GACGG‑C‑AT‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:1953785/96‑1 (MQ=255)
                                                       gaatataCAAAGGATAAATTT‑CGTTCCCCACC‑CGAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:2713783/97‑1 (MQ=255)
                                                       gaatataATAATGAAAAAATT‑CGTTTGCCACC‑CGAA‑A‑TT‑T‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:3021035/97‑1 (MQ=255)
                                                       gACTATCCTAATGAAAAATTT‑CTTTCCCCCCC‑CAAA‑T‑TT‑T‑GA‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:3001790/100‑1 (MQ=255)
                                                       gACTATATTAAGGATGAATTT‑CTTTTGCCACC‑CGAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:1160679/100‑1 (MQ=255)
                                                       gACTATATAAAAGATAAATTT‑CTTTTCCCACC‑AGAA‑A‑TT‑G‑GA‑GC‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:5281230/100‑1 (MQ=255)
                                                       gACTATACAAAGGAGAAATTT‑CGTTTCCCACC‑AAAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:2285398/100‑1 (MQ=255)
                                                       gACTATAATAAAGATGAATTT‑TGTTCCCCAGC‑AAAA‑A‑TT‑T‑GA‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCAtt                                       <  1:2977862/100‑1 (MQ=255)
                                                                catgatgAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑C‑GA‑GG‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTa                              >  1:3776121/2‑100 (MQ=255)
                                                                 ataaaaaaaTT‑TTTTTCCCACC‑CAAA‑A‑TT‑T‑GA‑GG‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTaa                             <  1:5104192/94‑1 (MQ=255)
                                                                 aaaaaaaaaTT‑TCTTTGCCCAC‑CAAA‑ATTT‑T‑GG‑GA‑C‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTa                              <  1:2025232/94‑1 (MQ=255)
                                                                  tgataaATTC‑CGTTTGCCATC‑CGAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAAt                            <  1:2868778/100‑1 (MQ=255)
                                                                         ttt‑CTTTTGCCATC‑TTAA‑G‑TT‑G‑GG‑GA‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCgg                     <  1:3512178/99‑2 (MQ=255)
                                                                           t‑CGTTTCCCACC‑CAAA‑A‑TT‑G‑GA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCt                   <  1:2982677/100‑1 (MQ=255)
                                                                            tttgttGCCAAG‑CGGA‑A‑TT‑T‑GG‑GG‑A‑AA‑ATAAAGCCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCgag                    <  1:518500/96‑3 (MQ=255)
                                                                             gtttggCCAAC‑CAAA‑A‑TT‑G‑GA‑GC‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCtt                  <  1:155065/95‑1 (MQ=255)
                                                                               tttccaccc‑cGAA‑A‑TG‑G‑GG‑GG‑A‑AA‑TTAAC‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTag                <  1:5593328/92‑2 (MQ=255)
                                                                                      accggAA‑A‑TT‑G‑GA‑GC‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTtc          <  1:4067796/96‑1 (MQ=255)
                                                                                      ac‑cGAA‑A‑TT‑T‑GG‑GG‑A‑AA‑ATAAACCCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATggat          <  1:1320026/99‑4 (MQ=255)
                                                                                       cccaaa‑a‑TT‑G‑GA‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTtca         <  1:4183353/96‑2 (MQ=255)
                                                                                       c‑cGAA‑A‑TT‑TGGA‑GA‑A‑AA‑TAAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTtct         <  1:5705751/100‑1 (MQ=255)
                                                                                        acaaa‑a‑TT‑T‑AA‑GG‑T‑AT‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTtcta        <  1:1214745/97‑2 (MQ=255)
                                                                                         acaaaactt‑t‑GA‑GG‑‑‑AA‑TTAAACCCGCCGATAACGCCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTtct         <  1:4576458/93‑1 (MQ=255)
                                                                                              attt‑t‑GA‑GA‑A‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTTCTCCttt    <  1:4311586/98‑1 (MQ=255)
                                                                                                  cgggA‑GG‑A‑AA‑TAAAA‑CCGCCGATAACGCCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTTCTCCTTTaa  <  1:487097/97‑1 (MQ=255)
                                                                                                           |                                                                                               
GTTGACTTACTTTTTCAGGTGTGCCTTTTAGAAGCAATATGGCAATGAAAGCAATGACTATACTAATGATGAAATT‑CGTTTGCCATC‑CGAA‑A‑TT‑T‑GA‑GG‑C‑AA‑TTAAA‑CCGCCGATAACACCAGCTAGGCCGATGCCACCAACAGTACTAATCATTAGATAACTAATCGCTCGTCTTAAATGTTCTCCTTTAA  >  NC_007793/320218‑320409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑