D66 :: BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	128,677	0	A	G	73.4%	1379.2 / inf	4168	N339N (AAT→AAC)	SAUSA300_RS00585	peptidoglycan‑binding protein LysM
Reads supporting (aligned to +/- strand): ref base A (20/1087); new base G (62/2996); total (82/4086)
Fisher's exact test for biased strand distribution p-value = 7.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.48e-01

Only 100 of 5104 total aligned reads displayed.

TTTGTTGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGAAGG  >  NC_007793/128578‑128775

tttGTTGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTa                                                                                                    <  1:4441131/100‑1 (MQ=255)

 ttgttgTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTAt                                                                                                   <  1:3842792/100‑1 (MQ=255)

  tgttgtCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGCCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTAtt                                                                                                  <  1:1882303/100‑1 (MQ=255)

   gttgtCTTCTTTACCAGGCTGGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTTCCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTg                                                                                                 <  1:2415909/100‑1 (MQ=255)

      ttccgatctACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtct                                                                                              <  1:46387/92‑1 (MQ=255)

      gtCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtct                                                                                              <  1:3950443/100‑1 (MQ=255)

      gtCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtct                                                                                              <  1:3448309/100‑1 (MQ=255)

       tcttctTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTgcccc                                                                                             <  1:5121572/100‑5 (MQ=255)

       tcttctTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtctt                                                                                             <  1:3202111/100‑1 (MQ=255)

       tcttctTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtctt                                                                                             <  1:1318992/100‑1 (MQ=255)

       tcttctTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtctt                                                                                             <  1:1828126/100‑1 (MQ=255)

       tcttctTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtctt                                                                                             <  1:4149015/100‑1 (MQ=255)

       tcttctTTACCAGGCTTGTTGCCATCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtctt                                                                                             <  1:5660383/100‑1 (MQ=255)

       cgatcttTGCCAGGCTTGTTGCCGTCTTCTTTACCAGGTTTTTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtctt                                                                                             <  1:2809520/97‑1 (MQ=11)

          tcttTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtcttcct                                                                                          <  1:1997705/100‑3 (MQ=255)

            tttACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtcttcctcg                                                                                        <  1:2352518/100‑5 (MQ=255)

                ccAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtcttcctcttttg                                                                                    >  1:5220354/1‑92 (MQ=255)

                 cAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtcttcctctttttg                                                                                   <  1:1090941/100‑10 (MQ=255)

                 cAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtcttcctcttttgg                                                                                   <  1:4746806/100‑10 (MQ=255)

                  aGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGtcttcctcttttggt                                                                                  <  1:1262708/100‑11 (MQ=255)

                       tgttgCCGTCTTCTTTGCCAGTCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCTTTACCAGGtttttt                                                                             <  1:3897792/100‑1 (MQ=17)

                                      tGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCTTTACCAGGCTTGTTGCCGTCTTctttgcc                                                              <  1:624651/100‑7 (MQ=11)

                                           ggtttgttgccgTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTgggc                                                         <  1:3091254/97‑3 (MQ=11)

                                           ggCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTgggca                                                         <  1:1192491/100‑3 (MQ=14)

                                           ggCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTgggg                                                         <  1:2300591/100‑3 (MQ=11)

                                           ggCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTgggc                                                         <  1:2248993/100‑3 (MQ=11)

                                           ggCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTg                                                         <  1:5374227/100‑1 (MQ=11)

                                           ggCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTg                                                         <  1:5270249/100‑1 (MQ=11)

                                           ggCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTg                                                         <  1:1522510/100‑1 (MQ=11)

                                           ggCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTg                                                         <  1:1000496/100‑1 (MQ=11)

                                            gCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGc                                                        <  1:4315379/100‑1 (MQ=11)

                                            gCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGc                                                        <  1:74135/100‑1 (MQ=11)

                                            gCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGc                                                        <  1:3538288/100‑1 (MQ=11)

                                            gCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGc                                                        <  1:4695732/100‑1 (MQ=11)

                                            gCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTGCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGc                                                        <  1:2485593/100‑1 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTTCCAGGCTTGTTTTCGACTTCTTTGCCAGGCTTGTTATTGTCTTTCTCTTTTGGTGCt                                                       <  1:1044393/100‑1 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCt                                                       <  1:2142928/100‑1 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGcc                                                       <  1:3038592/100‑2 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCt                                                       <  1:4807713/100‑1 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCt                                                       <  1:3672553/100‑1 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCt                                                       <  1:4001731/100‑1 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCt                                                       <  1:4912586/100‑1 (MQ=11)

                                             cTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCt                                                       <  1:2849907/100‑1 (MQ=11)

                                              ttgttgccgTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCtt                                                      <  1:2593847/100‑1 (MQ=11)

                                              ttgttgccgTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCtt                                                      <  1:1373013/100‑1 (MQ=11)

                                              ttgttgccgTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCta                                                      <  1:5475638/100‑2 (MQ=11)

                                              atctagccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCtt                                                      <  1:3795103/92‑1 (MQ=11)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:5320123/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:4263299/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:5605416/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:675180/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:795963/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:946215/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:3623329/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:3489579/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:3396358/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:3346813/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:1942373/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:2047432/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:3725750/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTg                                                     <  1:264370/100‑1 (MQ=1)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTCGGTGCTTg                                                     <  1:3302639/100‑1 (MQ=11)

                                               tgttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTATTATTGTCTTCCTCTTTTGGTGCtta                                                     <  1:2543739/100‑2 (MQ=11)

                                                gttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTgt                                                    <  1:889381/94‑2 (MQ=1)

                                                gttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGa                                                    <  1:4524572/94‑1 (MQ=11)

                                                 ttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTggt                                                   <  1:5758651/95‑3 (MQ=11)

                                                 ttgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTggg                                                   <  1:497130/95‑3 (MQ=11)

                                                  tgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGatg                                                  <  1:5548969/96‑3 (MQ=11)

                                                  tgccgtCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGc                                                  <  1:2699244/96‑1 (MQ=11)

                                                    ttgtCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCag                                                <  1:4579555/100‑2 (MQ=17)

                                                       tcttctTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGt                                             <  1:5024743/100‑1 (MQ=255)

                                                       tcttctTTACCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGt                                             <  1:3246199/100‑1 (MQ=255)

                                                               aCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCCTGAGCATCGtttagcttg                                     <  1:3150739/100‑2 (MQ=255)

                                                                 cAGGCTTGTTGTTGTCTTCTTTACCATGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTCTTGTCTTCCTCTTTTGGTGCTTGAGCATCGtttagcttttt                                   <  1:5793059/100‑1 (MQ=18)

                                                                 cAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGtttagcttttt                                   <  1:1777567/100‑1 (MQ=255)

                                                                 cAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGtttagctttag                                   <  1:4043385/100‑3 (MQ=255)

                                                                               tcttctTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTaaaa                     <  1:2898976/100‑1 (MQ=255)

                                                                                        ccAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGc            <  1:4202034/100‑1 (MQ=255)

                                                                                         cAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCt           <  1:5069340/100‑1 (MQ=255)

                                                                                         cAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCt           <  1:2097529/100‑1 (MQ=255)

                                                                                              ttgttgttgTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTg      <  1:1569641/100‑1 (MQ=255)

                                                                                               tgttgttgtCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGa     <  1:1716238/100‑1 (MQ=255)

                                                                                               tgttgttgtCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGa     >  1:5431232/1‑100 (MQ=255)

                                                                                               tgttgttgtCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGa     <  1:1143216/100‑1 (MQ=255)

                                                                                               tgttgttgtCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGa     <  1:4866868/100‑1 (MQ=255)

                                                                                               tgttgttgtCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGa     <  1:2946591/100‑1 (MQ=255)

                                                                                               tgttgttgtCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGa     <  1:2988438/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGTTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:5165512/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGTTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATCTCTTTGCTCACTGaa    <  1:409393/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:4372805/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:5712638/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:2764545/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:1622131/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:147298/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:3577670/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:448378/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTCGCTCACTGaa    <  1:2194635/100‑1 (MQ=255)

                                                                                                gttgttGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTGAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:1424057/100‑1 (MQ=255)

                                                                                                gttgttGTCTACTTTGCCAGGCTTGTTATTGTCTCCCTCCTTTGAAGCTTGAGCATCGTTTAACTTTTTAGCTTCTGCTAAAATTTCTTTACTCACTGaa    <  1:1667329/100‑1 (MQ=37)

                                                                                                gttgttGTATTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGAGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGaa    <  1:83802/100‑1 (MQ=255)

TTTGTTGTCTTCTTTACCAGGCTTGTTGCCGTCTTCTTTGCCAGGCTTGTTGTTGTCTTCTTTACCAGGCTTGTTGTTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCTTTGCCAGGCTTGTTATTGTCTTCCTCTTTTGGTGCTTGAGCATCGTTTAGCTTTTTAGCTTCTGCTAAAATTTCTTTGCTCACTGAAGG  >  NC_007793/128578‑128775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`